RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TMEM160Q9NX00 188 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 CTSZQ9UBR2 303 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 A0A0G2JMP0 313 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 A0A0X1KG70 313 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 OR2AT4A6NND4 320 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 TNFRSF13BO14836 293 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 HNF1AP20823 631 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 GABRA2P47869 451 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 NPY4RP50391 375 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 RPS11P62280 158 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 TBCEQ15813 527 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 WDR25Q64LD2 544 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 OR4M2Q8NGB6 313 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 THRSPQ92748 146 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 CPNE2Q96FN4 548 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 CEP19Q96LK0 163 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 OR14A2Q96R54 314 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 NRIP2Q9BQI9 281 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 SHARPINQ9H0F6 387 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 KAAG1Q9UBP8 84 aa16.38■□□□□ 0.21
SHKBP1-214ENST00000597396 KIAA1324LA8MWY0 1029 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 SPRY1O43609 319 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 MRPS14O60783 128 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 ACAA1P09110 424 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 FAHD2BQ6P2I3 314 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 PRIMA1Q86XR5 153 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 SVOPQ8N4V2 548 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 OR51A2Q8NGJ7 313 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 ANGPTL6Q8NI99 470 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 ORAI1Q96D31 301 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 FAHD2AQ96GK7 314 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 GPER1Q99527 375 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 TMED9Q9BVK6 235 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 DNTTIP1Q9H147 329 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 ISYNA1Q9NPH2 558 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 MTCH1Q9NZJ7 389 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 CKLFQ9UBR5 152 aa16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 POLR3KQ9Y2Y1 108 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-214ENST00000597396 ZNF879B4DU55 563 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 TRAPPC2LH3BP13 241 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 DVL1O14640 695 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 PSG2P11465 335 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 GATA3P23771 443 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 MAPK3P27361 379 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 MLLT11Q13015 90 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 PDZK1IP1Q13113 114 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 GPR50Q13585 617 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 KISS1Q15726 138 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 FAM120AOSQ5T036 256 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 ATPAF1Q5TC12 328 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 LIPKQ5VXJ0 399 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 ASPHD2Q6ICH7 369 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 ZNF529Q6P280 563 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 ZNF841Q6ZN19 808 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 ZNF367Q7RTV3 350 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 SATL1Q86VE3 508 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 MS4A15Q8N5U1 240 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 FAM216BQ8N7L0 139 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 OR5D18Q8NGL1 313 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 MED30Q96HR3 178 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 BEX2Q9BXY8 128 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 LPAR3Q9UBY5 353 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 CDC42EP3Q9UKI2 254 aa16.36■□□□□ 0.21
SHKBP1-214ENST00000597396 PPIAL4CA0A0B4J2A2 164 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 A0A1B0GW55 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 A0A1W2PPK0 400 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 NDUFB3O43676 98 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 TFF1P04155 84 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L2P0CJ85 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L3P0CJ86 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L4P0CJ87 422 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L5P0CJ88 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L6P0CJ89 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L7P0CJ90 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 BDKRB2P30411 391 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 ERVK11-1P61568 191 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 IL13RA1P78552 427 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 IKZF1Q13422 519 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 CHRFAM7AQ494W8 412 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4L9Q6RFH8 374 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 ZNF788Q6ZQV5 615 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 IL17RELQ6ZVW7 336 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 RNF144BQ7Z419 303 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 Q8IYB0 196 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 ST8SIA4Q92187 359 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 EMG1Q92979 244 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 GAFA1Q96PS6 74 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DERL3Q96Q80 235 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 MGLLQ99685 303 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 HES4Q9HCC6 221 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 SMURF1Q9HCE7 757 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 TMEM138Q9NPI0 162 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 ACOT13Q9NPJ3 140 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 MMP26Q9NRE1 261 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 DUX4Q9UBX2 424 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 OR14J1Q9UGF5 321 aa16.35■□□□□ 0.21
SHKBP1-214ENST00000597396 IGKV1D-17A0A075B6S4 117 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 LOC105371242A0A075B767 164 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 TRBV5-7A0A0A0MS05 114 aa16.34■□□□□ 0.21
SHKBP1-214ENST00000597396 RFPL4AA6NLU0 287 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms