RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 OR13C9Q8NGT0 318 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 RPS4Y2Q8TD47 263 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 SMIM19Q96E16 107 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 CPNE2Q96FN4 548 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 DMRTB1Q96MA1 342 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 OPALINQ96PE5 141 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 PCDHGB5Q9Y5G0 923 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 JMJD1CQ15652 2540 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 IGKV1-9A0A0C4DH69 117 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 SLC1A7O00341 560 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 SIGLEC5O15389 551 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 MAGEB3O15480 346 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 FPR2P25090 351 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 C21orf33P30042 268 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 WNT4P56705 351 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 IKZF1Q13422 519 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 FIP1L1Q6UN15 594 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 SLC25A26Q70HW3 274 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 FAM216BQ8N7L0 139 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 NANOGP1Q8N7R0 232 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 DACT3Q96B18 629 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 SDSLQ96GA7 329 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 CEP19Q96LK0 163 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 ZNF488Q96MN9 340 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 GAFA1Q96PS6 74 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 MND1Q9BWT6 205 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 SMURF1Q9HCE7 757 aa14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 SLC25A10Q9UBX3 287 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-212ENST00000596163 IGKV1D-17A0A075B6S4 117 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 IGKV1-27A0A075B6S5 117 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 RFPL4AA6NLU0 287 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 C22orf46C9J442 243 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 RFPL4AL1F8VTS6 287 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 SULT1B1O43704 296 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 KNG1P01042 644 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 ADRA2CP18825 462 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 AMY2BP19961 511 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 RAB3AP20336 220 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 EPHA1P21709 976 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 PRDX2P32119 198 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 CAV3P56539 151 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 ERVK11-1P61568 191 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 YIF1BQ5BJH7 314 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 DMKNQ6E0U4 476 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 XAF1Q6GPH4 301 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF561Q8N587 486 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 GHSRQ92847 366 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 CDCA4Q9BXL8 241 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 OCEL1Q9H607 264 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 CNTD2Q9H8S5 307 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 HES4Q9HCC6 221 aa14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 RPUSD1Q9UJJ7 312 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF879B4DU55 563 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 PLATP00750 562 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 CD1AP06126 327 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 HCKP08631 526 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 NDUFB7P17568 137 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 SOX2P48431 317 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 POU3F4P49335 361 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 CAPZA1P52907 286 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 BDH1Q02338 343 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 PDZK1IP1Q13113 114 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 METTL11BQ5VVY1 283 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF418Q8TF45 676 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 SLAMF9Q96A28 289 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 UPRTQ96BW1 309 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 Q9H521 79 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 RHOFQ9HBH0 211 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 MTCH1Q9NZJ7 389 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 GLS2Q9UI32 602 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF222Q9UK12 451 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 NUP50Q9UKX7 468 aa14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 SIRT4Q9Y6E7 314 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-212ENST00000596163 A0A0A6YYJ9 748 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 A0A1B0GW55 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 TCF21O43680 179 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 LALBAP00709 142 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 FSHBP01225 129 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 CHRM2P08172 466 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L2P0CJ85 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L3P0CJ86 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L4P0CJ87 422 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L5P0CJ88 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L6P0CJ89 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L7P0CJ90 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 FGF12P61328 243 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 PPP3R1P63098 170 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DGUOKQ16854 277 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4L9Q6RFH8 374 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 SAXO1Q8IYX7 474 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 CMTM4Q8IZR5 234 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 BPIFB2Q8N4F0 458 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 TMEM185AQ8NFB2 350 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 H1FXQ92522 213 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 RGP1Q92546 391 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 THRSPQ92748 146 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 TMEM106AQ96A25 262 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 CNBD2Q96M20 576 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms