RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 LHFPL3Q86UP9 236 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 CMTM4Q8IZR5 234 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 PACRGLQ8N7B6 248 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
USE1-207ENST00000596136 TNFRSF14Q92956 283 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 LHX4Q969G2 390 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 ADAT3Q96EY9 351 aaPredicted RBP10.73□□□□□ -0.69
USE1-207ENST00000596136 C4orf36Q96KX1 117 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 ALG8Q9BVK2 526 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 SEBOXQ9HB31 216 aaPredicted RBP10.73□□□□□ -0.69
USE1-207ENST00000596136 AMBNQ9NP70 447 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 FGF20Q9NP95 211 aaPredicted RBP10.73□□□□□ -0.69
USE1-207ENST00000596136 ERVK13-1Q9NX77 482 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 MTCH1Q9NZJ7 389 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 IGKV1-9A0A0C4DH69 117 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 MDFIC2A0A1B0GVS7 189 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 FAM230AA0A1W2PPH8 454 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 H3BSH0 61 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 NXPH2O95156 264 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 KNG1P01042 644 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 MT-ND2P03891 347 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 RPSAP08865 295 aaKnown RBP10.72□□□□□ -0.69
USE1-207ENST00000596136 NDUFB7P17568 137 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 MRPL28Q13084 256 aaKnown RBP10.72□□□□□ -0.69
USE1-207ENST00000596136 ZNF691Q5VV52 312 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 RUSC1-AS1Q66K80 236 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 ZNF561Q8N587 486 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 TMEM86BQ8N661 226 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 ZNF555Q8NEP9 628 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 OR52I1Q8NGK6 324 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 TRMT10AQ8TBZ6 339 aaKnown RBP10.72□□□□□ -0.69
USE1-207ENST00000596136 HAVCR2Q8TDQ0 301 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 NPRL2Q8WTW4 380 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 ISG20L2Q9H9L3 353 aaKnown RBP10.72□□□□□ -0.69
USE1-207ENST00000596136 ONECUT1Q9UBC0 465 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 HHLA2Q9UM44 414 aa10.72□□□□□ -0.69
USE1-207ENST00000596136 F8VVB4 439 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 F8VWA3 439 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 SLC1A7O00341 560 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 ALX3O95076 343 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 LIMS3P0CW19 117 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 LIMS4P0CW20 117 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 ATF1P18846 271 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 CFPP27918 469 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 RBP2P50120 134 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 ADARB1P78563 741 aaKnown RBP10.71□□□□□ -0.69
USE1-207ENST00000596136 CNN3Q15417 329 aaKnown RBP10.71□□□□□ -0.69
USE1-207ENST00000596136 SMN1Q16637 294 aaKnown RBP10.71□□□□□ -0.69
USE1-207ENST00000596136 TTC23Q5W5X9 447 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 C16orf87Q6PH81 154 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 TMEM185AQ8NFB2 350 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 OR51A4Q8NGJ6 313 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 OR10AC1Q8NH08 325 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 H1FXQ92522 213 aaKnown RBP10.71□□□□□ -0.69
USE1-207ENST00000596136 FGGYQ96C11 551 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 BORCS8Q96FH0 119 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 CEP19Q96LK0 163 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 DUX5Q96PT3 197 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 FAM234AQ9H0X4 552 aa10.71□□□□□ -0.69
USE1-207ENST00000596136 DSCAML1Q8TD84 2053 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 E9PI62 339 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 RNASEK-C17orf49H0YIS7 233 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 K7N7A8 449 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 CASQ2O14958 399 aaPredicted RBP10.7□□□□□ -0.7
USE1-207ENST00000596136 HOXA3O43365 443 aaPredicted RBP10.7□□□□□ -0.7
USE1-207ENST00000596136 ZFPL1O95159 310 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 MELTFP08582 738 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 PRKACBP22694 351 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 DCKP27707 260 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 ATP1B3P54709 279 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 GUCA2AQ02747 115 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 FOXL1Q12952 345 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 RCN1Q15293 331 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 AWAT1Q58HT5 328 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 SLC25A26Q70HW3 274 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 LDLRAD3Q86YD5 345 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 Q8IYB0 196 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 C11orf42Q8N5U0 333 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 SPSB1Q96BD6 273 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 METTL8Q9H825 291 aaKnown RBP10.7□□□□□ -0.7
USE1-207ENST00000596136 ELL3Q9HB65 397 aaPredicted RBP10.7□□□□□ -0.7
USE1-207ENST00000596136 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
USE1-207ENST00000596136 TMEM212A6NML5 194 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 ZNF737O75373 536 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 CLIC3O95833 236 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 TK1P04183 234 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 CHRM2P08172 466 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 CCDC159P0C7I6 412 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 ZNF20P17024 532 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
USE1-207ENST00000596136 PEX2P28328 305 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 CEBPDP49716 269 aaPredicted RBP10.69□□□□□ -0.7
USE1-207ENST00000596136 UBE2E1P51965 193 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 IL18R1Q13478 541 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 LRRC36Q1X8D7 754 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 OGFRL1Q5TC84 451 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms