RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 THRSPQ92748 146 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 SLAMF9Q96A28 289 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 RFT1Q96AA3 541 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 ORAI1Q96D31 301 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 CEP19Q96LK0 163 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 TMED9Q9BVK6 235 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 SSBP3Q9BWW4 388 aaPredicted RBP11.97□□□□□ -0.49
LIG1-208ENST00000595758 MTCH1Q9NZJ7 389 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 KAAG1Q9UBP8 84 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 CLN8Q9UBY8 286 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.49
LIG1-208ENST00000595758 A8MXK9 166 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 INAFM1C9JVW0 142 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 TMPRSS2O15393 492 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 GPX5O75715 221 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 INMTO95050 263 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 PSG2P11465 335 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 PCMT1P22061 227 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 MAPK3P27361 379 aaPredicted RBP11.96□□□□□ -0.49
LIG1-208ENST00000595758 TGFBR2P37173 567 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 ERVK11-1P61568 191 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 KISS1Q15726 138 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 ACSM3Q53FZ2 586 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
LIG1-208ENST00000595758 ZNF773Q6PK81 442 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 ZNF841Q6ZN19 808 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 SLC36A1Q7Z2H8 476 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 RNF144BQ7Z419 303 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 SATL1Q86VE3 508 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 BATF2Q8N1L9 274 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 ANGPTL6Q8NI99 470 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 CPNE2Q96FN4 548 aaPredicted RBP11.96□□□□□ -0.49
LIG1-208ENST00000595758 DERL3Q96Q80 235 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 DNTTIP1Q9H147 329 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 TMEM138Q9NPI0 162 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 CTSZQ9UBR2 303 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 OR5V1Q9UGF6 321 aa11.96□□□□□ -0.49
LIG1-208ENST00000595758 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
LIG1-208ENST00000595758 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 TRAV8-7A0A075B6U6 113 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 A0A0X1KG70 313 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 NKX6-3A6NJ46 265 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 KIAA1324LA8MWY0 1029 aaPredicted RBP11.95□□□□□ -0.5
LIG1-208ENST00000595758 F8VVB4 439 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 F8VWA3 439 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 SPRY1O43609 319 aaPredicted RBP11.95□□□□□ -0.5
LIG1-208ENST00000595758 ALDOBP05062 364 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 TMEM225BP0DP42 221 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 CPEP16870 476 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 IGFBP3P17936 291 aaPredicted RBP11.95□□□□□ -0.5
LIG1-208ENST00000595758 AMY2BP19961 511 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 BDKRB2P30411 391 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 GABRA2P47869 451 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 NPY4RP50391 375 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 KCTD21Q4G0X4 260 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 ARMCX4Q5H9R4 360 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 FAHD2BQ6P2I3 314 aaPredicted RBP11.95□□□□□ -0.5
LIG1-208ENST00000595758 UNQ9370/PRO34162Q6UXP9 181 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 CEACAM19Q7Z692 300 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 PHC2Q8IXK0 858 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 Q8IYB0 196 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 FAM216BQ8N7L0 139 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 OR4M2Q8NGB6 313 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 OR52N4Q8NGI2 321 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 OR5D18Q8NGL1 313 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 TMEM203Q969S6 136 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 FAHD2AQ96GK7 314 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 MED30Q96HR3 178 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 GPER1Q99527 375 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 HES4Q9HCC6 221 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 NOX4Q9NPH5 578 aa11.95□□□□□ -0.5
LIG1-208ENST00000595758 POLR3KQ9Y2Y1 108 aaPredicted RBP11.95□□□□□ -0.5
LIG1-208ENST00000595758 PPIAL4CA0A0B4J2A2 164 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 RFPL4AA6NLU0 287 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 RFPL4AL1F8VTS6 287 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 DVL1O14640 695 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 PIN1P1O15428 100 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 NDUFB3O43676 98 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 ANGPTL7O43827 346 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 TFF1P04155 84 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 FSTP19883 344 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 PRDX2P32119 198 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 IL13RA1P78552 427 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 IKZF1Q13422 519 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 INSL4Q14641 139 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 TRAM1Q15629 374 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 CR1LQ2VPA4 569 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 DDI2Q5TDH0 399 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 UBE2UQ5VVX9 321 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 CRIP3Q6Q6R5 217 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 SAXO1Q8IYX7 474 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 ZSCAN4Q8NAM6 433 aaPredicted RBP11.94□□□□□ -0.5
LIG1-208ENST00000595758 FCGR1BQ92637 280 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 SMURF1Q9HCE7 757 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 MMP26Q9NRE1 261 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms