RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MROQ9BYG7 248 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 PRSS22Q9GZN4 317 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 PPP1R3EQ9H7J1 279 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 SNTG1Q9NSN8 517 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 C14orf119Q9NWQ9 140 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 HAO2Q9NYQ3 351 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 H2AFY2Q9P0M6 372 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF391Q9UJN7 358 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 STARD9Q9P2P6 4700 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 A0A1W2PQ09 198 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 M0R1W7 72 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF254O75437 659 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 DUS4LO95620 317 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 MUC1P15941 1255 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 DCTDP32321 178 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 CXCR4P61073 352 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 CSNK2BP67870 215 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 MZT1Q08AG7 82 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 DYNAPQ8N1N2 210 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 OR8S1Q8NH09 359 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 PAPOLGQ9BWT3 736 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 ELL3Q9HB65 397 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 CLN6Q9NWW5 311 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 USE1Q9NZ43 259 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 IKZF2Q9UKS7 526 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 RHBDD3Q9Y3P4 386 aa11.06□□□□□ -0.64
SHKBP1-208ENST00000595726 A0A0U1RQV5 110 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 TMEM269A0A1B0GVZ9 245 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 TCRBV4S1A1TA0A5B7 111 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 ACOD1A6NK06 481 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 H0YAE9 185 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 SYNGR1O43759 233 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 IGLV3-1P01715 115 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 LMO1P25800 156 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 HTR1FP30939 366 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 GNALP38405 381 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 ALDH3A2P51648 485 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 RIDAP52758 137 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 ERVFRD-1P60508 538 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 MFGE8Q08431 387 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 CNN3Q15417 329 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 SNCBQ16143 134 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 DGUOKQ16854 277 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF829Q3KNS6 432 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF322Q6U7Q0 402 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 LIAT1Q6ZQX7 453 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 LHFPL4Q7Z7J7 247 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 FTMTQ8N4E7 242 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 OR1M1Q8NGA1 313 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 OR8J1Q8NGP2 316 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 MNTQ99583 582 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 PBOV1Q9GZY1 135 aa11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 WARS2Q9UGM6 360 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-208ENST00000595726 A6NDX4 124 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF670-ZNF695F2Z2N8 137 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 MAGEB4O15481 346 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 SRSF10O75494 262 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 CST4P01036 141 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 NDUFB7P17568 137 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 VDAC2P45880 294 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 CDC42P60953 191 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 PRDX4Q13162 271 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 BLMHQ13867 455 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 STUMQ69YW2 141 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 MKXQ8IYA7 352 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 LINC00482Q8N8I6 264 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 FAM81AQ8TBF8 368 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 TFAP2CQ92754 450 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 DPF1Q92782 380 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 MYDGFQ969H8 173 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 APOL4Q9BPW4 351 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 WDR13Q9H1Z4 485 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 MOB1AQ9H8S9 216 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 RNPEPL1Q9HAU8 725 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 SLC25A10Q9UBX3 287 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 NUFIP1Q9UHK0 495 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 TCF19Q9Y242 345 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 MPC1Q9Y5U8 109 aa11.04□□□□□ -0.64
SHKBP1-208ENST00000595726 ANXA2P2A6NMY6 339 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF850A8MQ14 1090 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 APOL3O95236 402 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 IL5RAQ01344 420 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 ATPAF1Q5TC12 328 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 C10orf99Q6UWK7 81 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 PLEKHG7Q6ZR37 379 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 KRT74Q7RTS7 529 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 C10orf67Q8IYJ2 551 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 CBR4Q8N4T8 237 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 OR51E1Q8TCB6 317 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 HPSE2Q8WWQ2 592 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 EME1Q96AY2 570 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 HRASLS5Q96KN8 279 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 GAFA1Q96PS6 74 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 RAB3IPQ96QF0 476 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms