RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 F8VVB4 439 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 F8VWA3 439 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 GATBO75879 557 aaKnown RBP18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 PRDX2P32119 198 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 FUT6P51993 359 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 DLX1P56177 255 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 PRB3Q04118 309 aaPredicted RBP18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 RAB40BQ12829 278 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 ALKBH1Q13686 389 aaKnown RBP18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 LPCAT4Q643R3 524 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 Q6YL49 198 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 SYS1Q8N2H4 156 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 TMEM185AQ8NFB2 350 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 GATAD2BQ8WXI9 593 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 SIRT7Q9NRC8 400 aa18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 RPL36Q9Y3U8 105 aaKnown RBP18.34■□□□□ 0.53
GTF2F1-204ENST00000594965 HOXA3O43365 443 aaPredicted RBP18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 NXPH2O95156 264 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 CLIC3O95833 236 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 FADS2O95864 444 aaKnown RBP18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 HKR1P10072 659 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 LRRC36Q1X8D7 754 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 ZNF691Q5VV52 312 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 METAP1DQ6UB28 335 aaPredicted RBP18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 PIP4P2Q8N4L2 257 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 ZNF555Q8NEP9 628 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 OR51A4Q8NGJ6 313 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 PP6455Q8WZ26 134 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 FGGYQ96C11 551 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 INPP5EQ9NRR6 644 aa18.33■□□□□ 0.52
GTF2F1-204ENST00000594965 E9PI62 339 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 SERPINA3P01011 423 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 CFPP27918 469 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 PEX2P28328 305 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 RCN1Q15293 331 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 UTS2BQ765I0 119 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 EGFL6Q8IUX8 553 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 CMTM4Q8IZR5 234 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 ZNF561Q8N587 486 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 TNFRSF14Q92956 283 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 BORCS8Q96FH0 119 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 NOX4Q9NPH5 578 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 HHLA2Q9UM44 414 aa18.32■□□□□ 0.52
GTF2F1-204ENST00000594965 RNASEK-C17orf49H0YIS7 233 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 LIMS3P0CW19 117 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 LIMS4P0CW20 117 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 ATF1P18846 271 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 CNN3Q15417 329 aaKnown RBP18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 AWAT1Q58HT5 328 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 DNAAF1Q8NEP3 725 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 CNIH3Q8TBE1 160 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 TAF15Q92804 592 aaKnown RBP eCLIP18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 ZDHHC16Q969W1 377 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 SLAMF9Q96A28 289 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 SLC25A28Q96A46 364 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 MRPL48Q96GC5 212 aaKnown RBP18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 FGF20Q9NP95 211 aaPredicted RBP18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 C19orf12Q9NSK7 152 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 OR14J1Q9UGF5 321 aa18.31■□□□□ 0.52
GTF2F1-204ENST00000594965 TRBV23-1A0A0A0MS06 115 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 A0A0U1RQK1 487 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 A0A1W2PQ09 198 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 ANKRD65E5RJM6 399 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 M0R1W7 72 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 KNG1P01042 644 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 MELTFP08582 738 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 ADARB1P78563 741 aaKnown RBP18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 KLRD1Q13241 179 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 KLHL22Q53GT1 634 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 C1orf122Q6ZSJ8 110 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 SLC25A26Q70HW3 274 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 RNF144BQ7Z419 303 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 PACRGLQ8N7B6 248 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 CEP19Q96LK0 163 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 JAM3Q9BX67 310 aa18.3■□□□□ 0.52
GTF2F1-204ENST00000594965 TENM1Q9UKZ4 2725 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 SLC1A7O00341 560 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 INMTO95050 263 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 ZFPL1O95159 310 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 ZNF20P17024 532 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 AZGP1P25311 298 aaKnown RBP18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 RBP2P50120 134 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 CAPZA1P52907 286 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 ATP1B3P54709 279 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 CRIP3Q6Q6R5 217 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 FAM185AQ8N0U4 392 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 ZNF676Q8N7Q3 588 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 MYCBPQ99417 103 aaPredicted RBP18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 UNKLQ9H9P5 680 aaKnown RBP18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 C8orf4Q9NR00 106 aa18.29■□□□□ 0.52
GTF2F1-204ENST00000594965 HAX1O00165 279 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 HCP5Q6MZN7 132 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 C16orf87Q6PH81 154 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 C11orf42Q8N5U0 333 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 OR13C3Q8NGS6 347 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 CYGBQ8WWM9 190 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 PDCD1LG2Q9BQ51 273 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 IL36RNQ9UBH0 155 aa18.28■□□□□ 0.52
GTF2F1-204ENST00000594965 ZNF737O75373 536 aa18.27■□□□□ 0.52
GTF2F1-204ENST00000594965 TK1P04183 234 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms