RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ZNF19P17023 458 aa16.69■□□□□ 0.26
LSM4-203ENST00000593829 GK2Q14410 553 aaPredicted RBP16.69■□□□□ 0.26
LSM4-203ENST00000593829 GTF3AQ92664 365 aaKnown RBP16.69■□□□□ 0.26
LSM4-203ENST00000593829 RBPMSQ93062 196 aaKnown RBP16.69■□□□□ 0.26
LSM4-203ENST00000593829 TMPRSS13Q9BYE2 586 aa16.69■□□□□ 0.26
LSM4-203ENST00000593829 LRP12Q9Y561 859 aa16.69■□□□□ 0.26
LSM4-203ENST00000593829 VPS13CQ709C8 3753 aa16.69■□□□□ 0.26
LSM4-203ENST00000593829 SNRPBP14678 240 aaKnown RBP16.68■□□□□ 0.26
LSM4-203ENST00000593829 GDNFP39905 211 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 OR12D2P58182 307 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 ZNF121P58317 390 aaPredicted RBP16.68■□□□□ 0.26
LSM4-203ENST00000593829 AP3S2P59780 193 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 ROM1Q03395 351 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 OR2T2Q6IF00 324 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 UNQ9370/PRO34162Q6UXP9 181 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 PGAP1Q75T13 922 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 OR2T35Q8NGX2 323 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 LHFPL5Q8TAF8 219 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 SMIM19Q96E16 107 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 NKIRAS2Q9NYR9 191 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 SULT1B1O43704 296 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 MT-ND4P03905 459 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 OR2T7P0C7T2 308 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 DAOP14920 347 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 SELEP16581 610 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 CTRB1P17538 263 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 MECP2P51608 486 aaKnown RBP16.68■□□□□ 0.26
LSM4-203ENST00000593829 ACTA2P62736 377 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 ACTG2P63267 376 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 CDK5R1Q15078 307 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 CTRB2Q6GPI1 263 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 MRPL21Q7Z2W9 205 aaKnown RBP16.68■□□□□ 0.26
LSM4-203ENST00000593829 ZNF679Q8IYX0 411 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 OR2T27Q8NH04 317 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 FAM168AQ92567 244 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 OR8B4Q96RC9 309 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 PPA2Q9H2U2 334 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 LIN7BQ9HAP6 207 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 MSL2Q9HCI7 577 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 ZDHHC8Q9ULC8 765 aa16.68■□□□□ 0.26
LSM4-203ENST00000593829 PSMD9O00233 223 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 SPRY3O43610 288 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 ZNF254O75437 659 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 TPPPO94811 219 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 CFDP00746 253 aaPredicted RBP16.67■□□□□ 0.26
LSM4-203ENST00000593829 HPXP02790 462 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 GIPP09681 153 aaPredicted RBP16.67■□□□□ 0.26
LSM4-203ENST00000593829 CD99P14209 185 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 MAGEB1P43366 347 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 PDLIM4P50479 330 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 CCL8P80075 99 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 MRPS10P82664 201 aaKnown RBP16.67■□□□□ 0.26
LSM4-203ENST00000593829 ZNF92Q03936 586 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 NHLRC3Q5JS37 347 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 GLYATL3Q5SZD4 288 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 OLFML2AQ68BL7 652 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 FAM57BQ71RH2 274 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 PRSS45Q7RTY3 260 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 OR5AS1Q8N127 324 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 FTMTQ8N4E7 242 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 OR52H1Q8NGJ2 320 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 DIRC2Q96SL1 478 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 MRI1Q9BV20 369 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 TMUB1Q9BVT8 246 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 TTTY10Q9BZA0 68 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 BRD7Q9NPI1 651 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 IKZF2Q9UKS7 526 aa16.67■□□□□ 0.26
LSM4-203ENST00000593829 C5orf63A6NC05 138 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 GABARAPH6UMI1 98 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 XRCC2O43543 280 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 IGHV1-46P01743 117 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 ADH4P08319 380 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 ZP3P21754 424 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 ANOS1P23352 680 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 GBX2P52951 348 aaPredicted RBP16.66■□□□□ 0.26
LSM4-203ENST00000593829 PSMA6P60900 246 aaKnown RBP16.66■□□□□ 0.26
LSM4-203ENST00000593829 EGR3Q06889 387 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 OPCMLQ14982 345 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 RFLNBQ8N5W9 214 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 OR2AE1Q8NHA4 323 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 REPIN1Q9BWE0 567 aaKnown RBP16.66■□□□□ 0.26
LSM4-203ENST00000593829 OR10A2Q9H208 303 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 OPA3Q9H6K4 179 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 HRASLSQ9HDD0 168 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 DECR2Q9NUI1 292 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 hCG_1807616A0A1W2PRN6 198 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 IQCF6A8MYZ5 107 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 PRR32B1ATL7 298 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 SCO1O75880 301 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 IL5P05113 134 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 DCTDP32321 178 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 MNDAP41218 407 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 RIDAP52758 137 aaKnown RBP16.66■□□□□ 0.26
LSM4-203ENST00000593829 RPL22L1Q6P5R6 122 aaKnown RBP16.66■□□□□ 0.26
LSM4-203ENST00000593829 BEST4Q8NFU0 473 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 OR8G5Q8NG78 346 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 RPS4Y2Q8TD47 263 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 C10orf105Q8TEF2 133 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 PGAM5Q96HS1 289 aa16.66■□□□□ 0.26
LSM4-203ENST00000593829 METTL17Q9H7H0 456 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms