RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 BAG2O95816 211 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 HTR1AP08908 422 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 ZNF19P17023 458 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 GABRB1P18505 474 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 CNN3Q15417 329 aaKnown RBP12.54□□□□□ -0.4
TRIM28-203ENST00000593582 NCR3LG1Q68D85 454 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 BATF2Q8N1L9 274 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 CD177Q8N6Q3 437 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 RHOXF1Q8NHV9 184 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
TRIM28-203ENST00000593582 BORCS8Q96FH0 119 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 ELL3Q9HB65 397 aaPredicted RBP12.54□□□□□ -0.4
TRIM28-203ENST00000593582 HES4Q9HCC6 221 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 FRRS1LQ9P0K9 344 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 OR14J1Q9UGF5 321 aa12.54□□□□□ -0.4
TRIM28-203ENST00000593582 A0A1W2PPH5 198 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 FAM181BA6NEQ2 426 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 H0YAE9 185 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 RNASEK-C17orf49H0YIS7 233 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 FADS2O95864 444 aaKnown RBP12.53□□□□□ -0.4
TRIM28-203ENST00000593582 KNG1P01042 644 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 ISG15P05161 165 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 CRYBA1P05813 215 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 DBTP11182 482 aaKnown RBP12.53□□□□□ -0.4
TRIM28-203ENST00000593582 ZNF20P17024 532 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 CCR9P51686 369 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 NANOS3P60323 173 aaKnown RBP12.53□□□□□ -0.4
TRIM28-203ENST00000593582 ERVK11-1P61568 191 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 PRB3Q04118 309 aaPredicted RBP12.53□□□□□ -0.4
TRIM28-203ENST00000593582 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
TRIM28-203ENST00000593582 FAM185AQ8N0U4 392 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 OR5D13Q8NGL4 314 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 C4orf36Q96KX1 117 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 CEP19Q96LK0 163 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 ZNF747Q9BV97 191 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 CHIAQ9BZP6 476 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 UNKLQ9H9P5 680 aaKnown RBP12.53□□□□□ -0.4
TRIM28-203ENST00000593582 FAM118AQ9NWS6 357 aa12.53□□□□□ -0.4
TRIM28-203ENST00000593582 IGKV1-27A0A075B6S5 117 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 NPFFO15130 113 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 FBP1P09467 338 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 OCM2P0CE71 109 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-203ENST00000593582 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-203ENST00000593582 RBP2P50120 134 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 UBE2E1P51965 193 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 DLX1P56177 255 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 RPL31P62899 125 aaKnown RBP12.52□□□□□ -0.41
TRIM28-203ENST00000593582 GALEQ14376 348 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 ZSCAN26Q16670 478 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 SHISA2Q6UWI4 295 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 LHFPL3Q86UP9 236 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 LDLRAD3Q86YD5 345 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 EGFL6Q8IUX8 553 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 FGGYQ96C11 551 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 ADAT3Q96EY9 351 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-203ENST00000593582 PELI1Q96FA3 418 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 ALG8Q9BVK2 526 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 DPAGT1Q9H3H5 408 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 AMBNQ9NP70 447 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 INPP5EQ9NRR6 644 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 C19orf12Q9NSK7 152 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 HHLA2Q9UM44 414 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
TRIM28-203ENST00000593582 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 CYB5AP00167 134 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 PAHP00439 452 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 IGHA1P01876 353 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 TK1P04183 234 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 RPSAP08865 295 aaKnown RBP12.51□□□□□ -0.41
TRIM28-203ENST00000593582 PRKACBP22694 351 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 OMGP23515 440 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 IER3P46695 156 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 ATP1B3P54709 279 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 MTCP1P56278 107 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 RAB40BQ12829 278 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 KLRD1Q13241 179 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 UTS2BQ765I0 119 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 Q8IYB0 196 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 SYS1Q8N2H4 156 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 ZNF555Q8NEP9 628 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 DYRK2Q92630 601 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■□□□□ 9.7
TRIM28-203ENST00000593582 SLAMF9Q96A28 289 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 RDH12Q96NR8 316 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 FAM234AQ9H0X4 552 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 SMPD3Q9NY59 655 aaPredicted RBP12.51□□□□□ -0.41
TRIM28-203ENST00000593582 MYRFQ9Y2G1 1151 aa12.51□□□□□ -0.41
TRIM28-203ENST00000593582 SF3B6Q9Y3B4 125 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms