RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ELMOD2Q8IZ81 293 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 OR14K1Q8NGZ2 314 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 NRBF2Q96F24 287 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 MNTQ99583 582 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 APOL4Q9BPW4 351 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 CDCA4Q9BXL8 241 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 OR14J1Q9UGF5 321 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 GTF2A1LQ9UNN4 478 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 R4GMQ9 66 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 NOTCH3Q9UM47 2321 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 A0A1B0GTI1 187 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 DHRS7CA6NNS2 312 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 C17orf98A8MV24 154 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 PLXNB1O43157 2135 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 CXCR4P61073 352 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 ACTR3P61158 418 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 ERVK11-1P61568 191 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 ESRRGP62508 458 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 PTGES3Q15185 160 aaKnown RBP19.35■□□□□ 0.69
LSM4-202ENST00000593564 FBLN7Q53RD9 439 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 FAHD1Q6P587 224 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 Q8N2B8 174 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 FOXRED1Q96CU9 486 aaPredicted RBP19.35■□□□□ 0.69
LSM4-202ENST00000593564 ZNF702PQ9H963 129 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 OR52A1Q9UKL2 312 aa19.35■□□□□ 0.69
LSM4-202ENST00000593564 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.35■□□□□ 0.69
LSM4-202ENST00000593564 TCRBV3S1A0A5B6 114 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 K7N7A8 449 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 FLOT2Q14254 428 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 MEPCEQ7L2J0 689 aaKnown RBP19.34■□□□□ 0.69
LSM4-202ENST00000593564 SLC35F2Q8IXU6 374 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 BATF2Q8N1L9 274 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 DYNAPQ8N1N2 210 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 NKX3-1Q99801 234 aaPredicted RBP19.34■□□□□ 0.69
LSM4-202ENST00000593564 PRRG3Q9BZD7 231 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 PKIBQ9C010 78 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 SERTAD4Q9NUC0 356 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 TCF19Q9Y242 345 aa19.34■□□□□ 0.69
LSM4-202ENST00000593564 TBL2Q9Y4P3 447 aaKnown RBP19.34■□□□□ 0.69
LSM4-202ENST00000593564 ODF3BA8MYP8 253 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 RBP4P02753 201 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 PIPP12273 146 aaPredicted RBP19.33■□□□□ 0.68
LSM4-202ENST00000593564 DAPP51397 102 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 IL24Q13007 206 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 OR13D1Q8NGV5 346 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 ADGRL4Q9HBW9 690 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 SLC22A13Q9Y226 551 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 SNX5Q9Y5X3 404 aa19.33■□□□□ 0.68
LSM4-202ENST00000593564 A6NIN4 97 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 MAGEB4O15481 346 aaPredicted RBP19.32■□□□□ 0.68
LSM4-202ENST00000593564 FBXO24O75426 580 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 CCL1P22362 96 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 COL10A1Q03692 680 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 AADACL4Q5VUY2 407 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 CCBE1Q6UXH8 406 aaPredicted RBP19.32■□□□□ 0.68
LSM4-202ENST00000593564 PLEKHG7Q6ZR37 379 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 REC114Q7Z4M0 266 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 BCDIN3DQ7Z5W3 292 aaKnown RBP19.32■□□□□ 0.68
LSM4-202ENST00000593564 ANGPTL5Q86XS5 388 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 ASCC1Q8N9N2 400 aaKnown RBP19.32■□□□□ 0.68
LSM4-202ENST00000593564 OR11H6Q8NGC7 330 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 RPS4Y2Q8TD47 263 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 MALSU1Q96EH3 234 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 ABCB10Q9NRK6 738 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 CLN6Q9NWW5 311 aa19.32■□□□□ 0.68
LSM4-202ENST00000593564 MRM2Q9UI43 246 aaKnown RBP19.32■□□□□ 0.68
LSM4-202ENST00000593564 A6NDX4 124 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 ZNF737O75373 536 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 ARG1P05089 322 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 ZNF728P0DKX0 622 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 HABP2Q14520 560 aaPredicted RBP19.31■□□□□ 0.68
LSM4-202ENST00000593564 CNN3Q15417 329 aaKnown RBP19.31■□□□□ 0.68
LSM4-202ENST00000593564 FAM189A2Q15884 450 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 PLA1AQ53H76 456 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 NXNL2Q5VZ03 156 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 ZNF626Q68DY1 528 aa19.31■□□□□ 0.68
LSM4-202ENST00000593564 H2AFY2Q9P0M6 372 aaPredicted RBP19.31■□□□□ 0.68
LSM4-202ENST00000593564 ZNF670-ZNF695F2Z2N8 137 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 M0R129 80 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 CHRM2P08172 466 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 RAB13P51153 203 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 EFNB1P98172 346 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 NSUN5P1Q3KNT7 163 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 DNAL1Q4LDG9 190 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 OR4S1Q8NGB4 309 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 TRMT10AQ8TBZ6 339 aaKnown RBP19.3■□□□□ 0.68
LSM4-202ENST00000593564 TMEM163Q8TC26 289 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 WIPF2Q8TF74 440 aaPredicted RBP19.3■□□□□ 0.68
LSM4-202ENST00000593564 PITPNC1Q9UKF7 332 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 SLC7A11Q9UPY5 501 aa19.3■□□□□ 0.68
LSM4-202ENST00000593564 XPNPEP2O43895 674 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 PRB2P02812 416 aaPredicted RBP19.29■□□□□ 0.68
LSM4-202ENST00000593564 IGHV1-8P0DP01 117 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 CD28P10747 220 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 EMX1Q04741 257 aaPredicted RBP19.29■□□□□ 0.68
LSM4-202ENST00000593564 SSX2Q16385 188 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 LDLRAD2Q5SZI1 272 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 SLX4IPQ5VYV7 408 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 Q6ZPA2 131 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 GDPD3Q7L5L3 318 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms