RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CA10Q9NS85 328 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 MYEF2Q9P2K5 600 aaKnown RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 DUSP13Q9UII6 198 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 MRPS7Q9Y2R9 242 aaKnown RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 HRNRQ86YZ3 2850 aaPredicted RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 IGKV1-12A0A0C4DH73 117 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 ISPDA4D126 451 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 RAB27BO00194 218 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 CRTAPO75718 401 aaPredicted RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 KDM4BO94953 1096 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 MPIG6BO95866 241 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 IGKV1D-12P01611 117 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 CD3EP07766 207 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 CSF3P09919 207 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 MPZP25189 248 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 HAAOP46952 286 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 PTH2RP49190 550 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 TAS2R20P59543 309 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 RPS27AP62979 156 aaKnown RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 MRPS10P82664 201 aaKnown RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 MZT1Q08AG7 82 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 MADCAM1Q13477 382 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 RSU1Q15404 277 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 BAK1Q16611 211 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 VHLLQ6RSH7 139 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 LRP11Q86VZ4 500 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 MKXQ8IYA7 352 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 IZUMO1Q8IYV9 350 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 FAM89BQ8N5H3 189 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 ZNF611Q8N823 705 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 OR51F2Q8NH61 342 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 DVL3Q92997 716 aaPredicted RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 MRPS24Q96EL2 167 aaKnown RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 PLPPR2Q96GM1 343 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 TM2D1Q9BX74 207 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 TMEM59Q9BXS4 323 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 LIME1Q9H400 295 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 ELL3Q9HB65 397 aaPredicted RBP11.45□□□□□ -0.58
VMP1-217ENST00000593168 ABCB10Q9NRK6 738 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 C14orf119Q9NWQ9 140 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 NKIRAS2Q9NYR9 191 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 ATP23Q9Y6H3 246 aa11.45□□□□□ -0.58
VMP1-217ENST00000593168 ABCA2Q9BZC7 2435 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
VMP1-217ENST00000593168 A0A1W2PP11 408 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 LRP5LA4QPB2 252 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 J3QT63 122 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 MLNRO43193 412 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 GSTZ1O43708 216 aaPredicted RBP11.44□□□□□ -0.58
VMP1-217ENST00000593168 HTR3BO95264 441 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 CYB5AP00167 134 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 CSTBP04080 98 aaKnown RBP11.44□□□□□ -0.58
VMP1-217ENST00000593168 IL7P13232 177 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 GTF2F2P13984 249 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 MGMTP16455 207 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 SERPINA2P20848 420 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 IL24Q13007 206 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 SNTB1Q13884 538 aaKnown RBP11.44□□□□□ -0.58
VMP1-217ENST00000593168 ELP2Q6IA86 826 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 HAGHLQ6PII5 290 aaPredicted RBP11.44□□□□□ -0.58
VMP1-217ENST00000593168 Q6ZR03 302 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 SLC25A26Q70HW3 274 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 LYSMD2Q8IV50 215 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 OR8H2Q8N162 312 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 MRPL37Q9BZE1 423 aaKnown RBP11.44□□□□□ -0.58
VMP1-217ENST00000593168 BANF2Q9H503 90 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 DLL4Q9NR61 685 aa11.44□□□□□ -0.58
VMP1-217ENST00000593168 TRAV18A0A075B6X5 111 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 PLSCR5A0PG75 271 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 H0YL77 283 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 AKR7A2O43488 359 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 PLATP00750 562 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
VMP1-217ENST00000593168 CPT2P23786 658 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 VEGFCP49767 419 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 SCN1BQ07699 218 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 ADIPOQQ15848 244 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 MOGAT2Q3SYC2 334 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 STEAP3Q658P3 488 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 DNM1P46Q6ZS02 220 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 WDR86Q86TI4 376 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 SNX29P2Q8IUI4 249 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 OR56B1Q8NGI3 324 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 OR51T1Q8NGJ9 327 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 OR10R2Q8NGX6 335 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 NINJ1Q92982 152 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 SYT3Q9BQG1 590 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
VMP1-217ENST00000593168 SELENOIQ9C0D9 397 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 PLK3Q9H4B4 646 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 RHOFQ9HBH0 211 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 MSL2Q9HCI7 577 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 TAAR3PQ9P1P4 343 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 POU2F3Q9UKI9 436 aa11.43□□□□□ -0.58
VMP1-217ENST00000593168 FLNAP21333 2647 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms