RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	ZDHHC22	Q8N966	263 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	ZNRF1	Q8ND25	227 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	DNAAF1	Q8NEP3	725 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	OR51A4	Q8NGJ6	313 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	OR13C3	Q8NGS6	347 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	HAVCR2	Q8TDQ0	301 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	H1FX	Q92522	213 aa	Known RBP	13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	BORCS8	Q96FH0	119 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	HES4	Q9HCC6	221 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	ESM1	Q9NQ30	184 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	KPTN	Q9Y664	436 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	HSPE1-MOB4	S4R3N1	261 aa		13.54	□□□□□ -0.24
CIRBP-233	ENST00000591622	IGKV1-9	A0A0C4DH69	117 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	RFPL4A	A6NLU0	287 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	RFPL4AL1	F8VTS6	287 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	ZFPL1	O95159	310 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	NDUFB7	P17568	137 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	PRDX2	P32119	198 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	RBP2	P50120	134 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	ETV1	P50549	477 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	PDCD1	Q15116	288 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	BRD3OS	Q6XYD6	125 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	CD177	Q8N6Q3	437 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	OR5AK2	Q8NH90	309 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	C8orf46	Q8TAG6	207 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	ZNF48	Q96MX3	618 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	VCX	Q9H320	206 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	MTCH1	Q9NZJ7	389 aa		13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	DIMT1	Q9UNQ2	313 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	SOX21	Q9Y651	276 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-233	ENST00000591622	CENPVL3	A0A0U1RRI6	287 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	TMEM212	A6NML5	194 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	SLC1A7	O00341	560 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	GNAO1	P09471	354 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	CCDC159	P0C7I6	412 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	ATF1	P18846	271 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	PRKACB	P22694	351 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	AZGP1	P25311	298 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	ATP1B3	P54709	279 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	SLC34A1	Q06495	639 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	TMPRSS11A	Q6ZMR5	421 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	SLC25A26	Q70HW3	274 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	BATF2	Q8N1L9	274 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	ZNF561	Q8N587	486 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	KIR3DL3	Q8N743	410 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	TMEM185A	Q8NFB2	350 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	FAM216A	Q8WUB2	273 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	SPSB1	Q96BD6	273 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	CEP19	Q96LK0	163 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	COMMD4	Q9H0A8	199 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	ONECUT1	Q9UBC0	465 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	CAB39	Q9Y376	341 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	WNK2	Q9Y3S1	2297 aa		13.52	□□□□□ -0.25
CIRBP-233	ENST00000591622	TRBV2	A0A0J9YWF9	115 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622		F8VVB4	439 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622		F8VWA3	439 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	KNG1	P01042	644 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	MYL12A	P19105	171 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	GTF2A1	P52655	376 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	MTCP1	P56278	107 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	CCDC58	Q4VC31	144 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	CMTM4	Q8IZR5	234 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	LHX4	Q969G2	390 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	SLAMF9	Q96A28	289 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	TMEM80	Q96HE8	168 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	PDCD1LG2	Q9BQ51	273 aa		13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	ELL3	Q9HB65	397 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-233	ENST00000591622	TRBV23-1	A0A0A0MS06	115 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	INMT	O95050	263 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	MT-ND2	P03891	347 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	OCM2	P0CE71	109 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	OCM	P0CE72	109 aa	Predicted RBP	13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	CEBPD	P49716	269 aa	Predicted RBP	13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	CAPZA1	P52907	286 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	UBA52	P62987	128 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	BAMBI	Q13145	260 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	OR2G6	Q5TZ20	316 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	RUSC1-AS1	Q66K80	236 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	XAF1	Q6GPH4	301 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	RPL22L1	Q6P5R6	122 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	C1orf122	Q6ZSJ8	110 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	LHFPL2	Q6ZUX7	228 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	VMO1	Q7Z5L0	202 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	SERPINA12	Q8IW75	414 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	MKX	Q8IYA7	352 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	OR13C9	Q8NGT0	318 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	GATAD2B	Q8WXI9	593 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	TFAP2C	Q92754	450 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	GGH	Q92820	318 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	OPALIN	Q96PE5	141 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	OR14J1	Q9UGF5	321 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	STAB1	Q9NY15	2570 aa		13.5	□□□□□ -0.25
CIRBP-233	ENST00000591622	IGHV1-69D	A0A0B4J2H0	117 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622		A0A1W2PQ09	198 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	ERICH4	A6NGS2	130 aa		13.49	□□□□□ -0.25
CIRBP-233	ENST00000591622	DNAJC9-AS1	A6NH13	148 aa		13.49	□□□□□ -0.25

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