RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 LIPFP07098 398 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 PPIAL4GP0DN37 164 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 MTCP1P56278 107 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 ERVK11-1P61568 191 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 SLC35A2P78381 396 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 IL13RA1P78552 427 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 PAX8Q06710 450 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 LRRC10Q5BKY1 277 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 DMKNQ6E0U4 476 aaPredicted RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 ACP7Q6ZNF0 438 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 ZNF788Q6ZQV5 615 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 C1QL2Q7Z5L3 287 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 Q8IYB0 196 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 FAM216BQ8N7L0 139 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 NANOGP1Q8N7R0 232 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 PNLDC1Q8NA58 520 aaKnown RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 OR13C9Q8NGT0 318 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 NANPQ8TBE9 248 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 RGP1Q92546 391 aaPredicted RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 NUDT16L1Q9BRJ7 211 aaKnown RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 CDCA4Q9BXL8 241 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 HES4Q9HCC6 221 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 OPN4Q9UHM6 478 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 ZNF281Q9Y2X9 895 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 RRP15Q9Y3B9 282 aaKnown RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 TPRKBQ9Y3C4 175 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 SIRT4Q9Y6E7 314 aaPredicted RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 FBN1P35555 2871 aaKnown RBP9.88□□□□□ -0.83
LIG3-213ENST00000590630 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 IGKV1D-17A0A075B6S4 117 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 VGLL3A8MV65 326 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 C22orf46C9J442 243 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 SIGLEC5O15389 551 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 SULT1B1O43704 296 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 CYB5AP00167 134 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 PSG2P11465 335 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 AMY2BP19961 511 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 BDH1Q02338 343 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 YIF1BQ5BJH7 314 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 SLC25A26Q70HW3 274 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 MKXQ8IYA7 352 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 ST8SIA4Q92187 359 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 GHSRQ92847 366 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 TMEM106AQ96A25 262 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 CPNE2Q96FN4 548 aaPredicted RBP9.87□□□□□ -0.83
LIG3-213ENST00000590630 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 DMRTB1Q96MA1 342 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 ZNF488Q96MN9 340 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 GAFA1Q96PS6 74 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 ZNF184Q99676 751 aaPredicted RBP9.87□□□□□ -0.83
LIG3-213ENST00000590630 PAK1IP1Q9NWT1 392 aaPredicted RBP9.87□□□□□ -0.83
LIG3-213ENST00000590630 MTCH1Q9NZJ7 389 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 METRNQ9UJH8 293 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 ZNF222Q9UK12 451 aa9.87□□□□□ -0.83
LIG3-213ENST00000590630 A0A1B0GW55 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 RFPL4AA6NLU0 287 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 RFPL4AL1F8VTS6 287 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 FCN3O75636 299 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 PLATP00750 562 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 KNG1P01042 644 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 FSHBP01225 129 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 CD1AP06126 327 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 HCKP08631 526 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L2P0CJ85 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L3P0CJ86 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L4P0CJ87 422 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L5P0CJ88 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L6P0CJ89 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L7P0CJ90 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 ADRA2CP18825 462 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 RAB3AP20336 220 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 CRHBPP24387 322 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 GABRA2P47869 451 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 SOX2P48431 317 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 POU3F4P49335 361 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 CAV3P56539 151 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 ACSM1Q08AH1 577 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 PDZK1IP1Q13113 114 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 IKZF1Q13422 519 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 ARMCX4Q5H9R4 360 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 ZNF529Q6P280 563 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
LIG3-213ENST00000590630 BTN2A1Q7KYR7 527 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 ZNF561Q8N587 486 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 SLAMF9Q96A28 289 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 SDSLQ96GA7 329 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 PGLYRP3Q96LB9 341 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 CNBD2Q96M20 576 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 Q9H521 79 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUSP21Q9H596 190 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DUX4Q9UBX2 424 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 SLC25A10Q9UBX3 287 aaPredicted RBP9.86□□□□□ -0.83
LIG3-213ENST00000590630 RPUSD1Q9UJJ7 312 aaKnown RBP9.86□□□□□ -0.83
LIG3-213ENST00000590630 BLOC1S6Q9UL45 172 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 DSCAML1Q8TD84 2053 aa9.86□□□□□ -0.83
LIG3-213ENST00000590630 TRBV5-5A0A0J9YX44 114 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 MAGEB3O15480 346 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 RGS10O43665 173 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 SELLP14151 372 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms