RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 F8P00451 2351 aa16.02■□□□□ 0.15
DDX39A-214ENST00000590556 TRDV1A0A1B0GX56 115 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 MEGF11A6BM72 1044 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 CEACAM18A8MTB9 384 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 TRAPPC2LH3BP13 241 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 NDUFA2O43678 99 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 ANGPTL7O43827 346 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 NXPH2O95156 264 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 GYPAP02724 150 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 JUNBP17275 347 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-214ENST00000590556 SRMP19623 302 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 ZNF93P35789 620 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-214ENST00000590556 SMIM21Q3B7S5 101 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 CD200R1LQ6Q8B3 271 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 ACP7Q6ZNF0 438 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 DCDC5Q6ZRR9 648 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 SAXO1Q8IYX7 474 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 BATF2Q8N1L9 274 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 C12orf43Q96C57 262 aaKnown RBP16.01■□□□□ 0.15
DDX39A-214ENST00000590556 SNTG1Q9NSN8 517 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 NLKQ9UBE8 527 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 MIOXQ9UGB7 285 aa16.01■□□□□ 0.15
DDX39A-214ENST00000590556 SMIM18P0DKX4 95 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 RPS2P15880 293 aaKnown RBP16■□□□□ 0.15
DDX39A-214ENST00000590556 GALP22466 123 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 ZP1P60852 638 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 ERVK11-1P61568 191 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 LYPD2Q6UXB3 125 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 Q8IYB0 196 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 JAGN1Q8N5M9 183 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 PNLDC1Q8NA58 520 aaKnown RBP16■□□□□ 0.15
DDX39A-214ENST00000590556 ZSCAN4Q8NAM6 433 aaPredicted RBP16■□□□□ 0.15
DDX39A-214ENST00000590556 OR5T2Q8NGG2 359 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 TNFAIP8L1Q8WVP5 186 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 NKX3-1Q99801 234 aaPredicted RBP16■□□□□ 0.15
DDX39A-214ENST00000590556 STUB1Q9UNE7 303 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 ZANQ9Y493 2812 aa16■□□□□ 0.15
DDX39A-214ENST00000590556 ZNF469Q96JG9 3925 aaPredicted RBP16■□□□□ 0.15
DDX39A-214ENST00000590556 IGKV1-12A0A0C4DH73 117 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 OR2AT4A6NND4 320 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 TNFRSF13BO14836 293 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-214ENST00000590556 ADAM20O43506 726 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 IGKV1D-12P01611 117 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 WNT2P09544 360 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 IGHV4-31P0DP07 118 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 CD36P16671 472 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 BCL3P20749 454 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 CPT2P23786 658 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 CALRP27797 417 aaKnown RBP15.99■□□□□ 0.15
DDX39A-214ENST00000590556 GZMKP49863 264 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 STUMQ69YW2 141 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 NLRC3Q7RTR2 1065 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 LRRTM1Q86UE6 522 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 CDH26Q8IXH8 852 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 NKAIN3Q8N8D7 197 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 NEIL1Q96FI4 390 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-214ENST00000590556 MRPS26Q9BYN8 205 aaKnown RBP15.99■□□□□ 0.15
DDX39A-214ENST00000590556 FAM192AQ9GZU8 254 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 HES4Q9HCC6 221 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 SMURF1Q9HCE7 757 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 EXOSC4Q9NPD3 245 aaKnown RBP15.99■□□□□ 0.15
DDX39A-214ENST00000590556 SSR3Q9UNL2 185 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 CSPG4Q6UVK1 2322 aa15.99■□□□□ 0.15
DDX39A-214ENST00000590556 ABCA1O95477 2261 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 FAM157AC9JC47 383 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 F5H0A9 414 aaPredicted RBP15.98■□□□□ 0.15
DDX39A-214ENST00000590556 F8VVB4 439 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 F8VWA3 439 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 KDM4BO94953 1096 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 PSG2P11465 335 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 ADRA2CP18825 462 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 PTGFRP43088 359 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 OR3A4PP47883 348 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 NPBWR2P48146 333 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 CYB5R2Q6BCY4 276 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 C22orf42Q6IC83 251 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 FAM58AQ8N1B3 248 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 PXT1Q8NFP0 134 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 OR8B3Q8NGG8 313 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 EMG1Q92979 244 aaKnown RBP15.98■□□□□ 0.15
DDX39A-214ENST00000590556 C1orf159Q96HA4 380 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 OR8B2Q96RD0 313 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 CCL13Q99616 98 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 ELL3Q9HB65 397 aaPredicted RBP15.98■□□□□ 0.15
DDX39A-214ENST00000590556 RBFOX1Q9NWB1 397 aaKnown RBP15.98■□□□□ 0.15
DDX39A-214ENST00000590556 ING4Q9UNL4 249 aa15.98■□□□□ 0.15
DDX39A-214ENST00000590556 ABCA2Q9BZC7 2435 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 GABRA2P47869 451 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 ATPAF1Q5TC12 328 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-214ENST00000590556 GLT8D1Q68CQ7 371 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 FIP1L1Q6UN15 594 aaKnown RBP15.97■□□□□ 0.15
DDX39A-214ENST00000590556 C1QL2Q7Z5L3 287 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 LINC01356Q8N9X3 169 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 ANGPTL6Q8NI99 470 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 S100A13Q99584 98 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 DNTTIP1Q9H147 329 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 OR51E2Q9H255 320 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 RHOFQ9HBH0 211 aa15.97■□□□□ 0.15
DDX39A-214ENST00000590556 TXNL4BQ9NX01 149 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms