RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SMN1Q16637 294 aaKnown RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 DGUOKQ16854 277 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF691Q5VV52 312 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 BTN2A1Q7KYR7 527 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 LHFPL3Q86UP9 236 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF573Q86YE8 665 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 CALHM1Q8IU99 346 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 EGFL6Q8IUX8 553 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 RDH10Q8IZV5 341 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 BCL6BQ8N143 479 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 SYS1Q8N2H4 156 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ZDHHC22Q8N966 263 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 POC1AQ8NBT0 407 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 LY6G5BQ8NDX9 201 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 OR52I1Q8NGK6 324 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF671Q8TAW3 534 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ST8SIA4Q92187 359 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 C10orf35Q96D05 121 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 C4orf36Q96KX1 117 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF48Q96MX3 618 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 TBX15Q96SF7 602 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 NRIP2Q9BQI9 281 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ALG8Q9BVK2 526 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 JAM3Q9BX67 310 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 SUCNR1Q9BXA5 334 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 SIRPDQ9H106 197 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 HES4Q9HCC6 221 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 INPP5EQ9NRR6 644 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 ERVK13-1Q9NX77 482 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 NLKQ9UBE8 527 aa9.25□□□□□ -0.93
SMAD4-211ENST00000590499 RPUSD1Q9UJJ7 312 aaKnown RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 RPL36Q9Y3U8 105 aaKnown RBP9.25□□□□□ -0.93
SMAD4-211ENST00000590499 DSCAML1Q8TD84 2053 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 IGKV1-27A0A075B6S5 117 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 NKX6-3A6NJ46 265 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 OR4C45A6NMZ5 311 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 CLIC3O95833 236 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 FADS2O95864 444 aaKnown RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 SFTPBP07988 381 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ACAA1P09110 424 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 PSG2P11465 335 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 FPR2P25090 351 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ERVK11-1P61568 191 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ADARB1P78563 741 aaKnown RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 LRRC36Q1X8D7 754 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 OGFRL1Q5TC84 451 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 TMEM244Q5VVB8 128 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ACP7Q6ZNF0 438 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 PNLDC1Q8NA58 520 aaKnown RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF555Q8NEP9 628 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 OR10AC1Q8NH08 325 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 C8orf46Q8TAG6 207 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 TMIGD2Q96BF3 282 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ADAT3Q96EY9 351 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 SDSLQ96GA7 329 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 C1orf147Q96MC9 270 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF488Q96MN9 340 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 PKIBQ9C010 78 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 WNT10AQ9GZT5 417 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 ISG20L2Q9H9L3 353 aaKnown RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 PLEKHA1Q9HB21 404 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 FGF20Q9NP95 211 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 RASL12Q9NYN1 266 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 POLDIP2Q9Y2S7 368 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 MAB21L2Q9Y586 359 aa9.24□□□□□ -0.93
SMAD4-211ENST00000590499 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-211ENST00000590499 IGHV3OR16-10A0A075B7F0 116 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 IGKV1-9A0A0C4DH69 117 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 E9PI62 339 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 J3QLW9 94 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 NDUFB3O43676 98 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 GATBO75879 557 aaKnown RBP9.23□□□□□ -0.93
SMAD4-211ENST00000590499 HTR1AP08908 422 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 LIMS3P0CW19 117 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 LIMS4P0CW20 117 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 ZNF19P17023 458 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 CAV3P56539 151 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 IL13RA1P78552 427 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 IL24Q13007 206 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 IKZF1Q13422 519 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 ALKBH1Q13686 389 aaKnown RBP9.23□□□□□ -0.93
SMAD4-211ENST00000590499 SMIM21Q3B7S5 101 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 LRRC10Q5BKY1 277 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 TTC23Q5W5X9 447 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 ANGPTL5Q86XS5 388 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 CD177Q8N6Q3 437 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 SIGLECL1Q8N7X8 197 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 OR51A4Q8NGJ6 313 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 CNIH3Q8TBE1 160 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 TRMT10AQ8TBZ6 339 aaKnown RBP9.23□□□□□ -0.93
SMAD4-211ENST00000590499 FAM216AQ8WUB2 273 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 PP6455Q8WZ26 134 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 MRPL48Q96GC5 212 aaKnown RBP9.23□□□□□ -0.93
SMAD4-211ENST00000590499 MED30Q96HR3 178 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 WDFY2Q96P53 400 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 JMJD8Q96S16 334 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 PCGF1Q9BSM1 259 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 DCTN5Q9BTE1 182 aa9.23□□□□□ -0.93
SMAD4-211ENST00000590499 ADI1Q9BV57 179 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms