RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR4M1Q8NGD0 313 aa11.28□□□□□ -0.6
VMP1-209ENST00000588915 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
VMP1-209ENST00000588915 TEAD3Q99594 435 aa11.28□□□□□ -0.6
VMP1-209ENST00000588915 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
VMP1-209ENST00000588915 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 B2RBV5 119 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 ARG1P05089 322 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 CHRM2P08172 466 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 ANXA8P13928 327 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 RAB13P51153 203 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 ACTR3P61158 418 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 ERVK11-1P61568 191 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 CD83Q01151 205 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.61
VMP1-209ENST00000588915 SSX2Q16385 188 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 DMRTC1Q5HYR2 192 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 ZNF782Q6ZMW2 699 aaPredicted RBP11.27□□□□□ -0.61
VMP1-209ENST00000588915 Q6ZSR3 168 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 ZNF488Q96MN9 340 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 PKIBQ9C010 78 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 MOB1AQ9H8S9 216 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
VMP1-209ENST00000588915 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
VMP1-209ENST00000588915 GNGT2O14610 69 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 ATP8B1O43520 1251 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 TTRP02766 147 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 AZGP1P25311 298 aaKnown RBP11.26□□□□□ -0.61
VMP1-209ENST00000588915 HCCSP53701 268 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 OR12D2P58182 307 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 MEF2CQ06413 473 aaPredicted RBP11.26□□□□□ -0.61
VMP1-209ENST00000588915 IL24Q13007 206 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 APOFQ13790 326 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 FOXB2Q5VYV0 432 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 BBS1Q8NFJ9 593 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 ASB9Q96DX5 294 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 NSL1Q96IY1 281 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 LRGUKQ96M69 825 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 MNTQ99583 582 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 OCSTAMPQ9BR26 566 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 SLC25A19Q9HC21 320 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 TAS2R1Q9NYW7 299 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.26□□□□□ -0.61
VMP1-209ENST00000588915 OR14J1Q9UGF5 321 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 V9GYS6 101 aa11.26□□□□□ -0.61
VMP1-209ENST00000588915 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 PSMD9O00233 223 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 ZNF737O75373 536 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 SRSF10O75494 262 aaKnown RBP11.25□□□□□ -0.61
VMP1-209ENST00000588915 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 CD33P20138 364 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
VMP1-209ENST00000588915 CEBPDP49716 269 aaPredicted RBP11.25□□□□□ -0.61
VMP1-209ENST00000588915 BLCAPP62952 87 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 SNAPC1Q16533 368 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 PLA1AQ53H76 456 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
VMP1-209ENST00000588915 VAX1Q5SQQ9 334 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 ZBTB49Q6ZSB9 765 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 GDPD3Q7L5L3 318 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 C16orf82Q7Z2V1 217 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 TMEM219Q86XT9 240 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 ELMOD2Q8IZ81 293 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 OR14K1Q8NGZ2 314 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 SLC22A13Q9Y226 551 aa11.25□□□□□ -0.61
VMP1-209ENST00000588915 hADV38S2A0JD32 116 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 AQP12BA6NM10 295 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 LOC110117498-PIK3R3F6TDL0 507 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 F2RL2O00254 374 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 DUS4LO95620 317 aaKnown RBP11.24□□□□□ -0.61
VMP1-209ENST00000588915 PIPP12273 146 aaPredicted RBP11.24□□□□□ -0.61
VMP1-209ENST00000588915 COL10A1Q03692 680 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 LDLRAD2Q5SZI1 272 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 ASRGL1Q7L266 308 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 TMEM179BQ7Z7N9 219 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 AQP12AQ8IXF9 295 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 ADGRG5Q8IZF4 528 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 OR8H2Q8N162 312 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 ASCC1Q8N9N2 400 aaKnown RBP11.24□□□□□ -0.61
VMP1-209ENST00000588915 OR5AU1Q8NGC0 362 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 DNAJC9Q8WXX5 260 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 AKR1E2Q96JD6 320 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 SNX22Q96L94 193 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 ZNF714Q96N38 554 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 GPR173Q9NS66 373 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 IKZF2Q9UKS7 526 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 SLC7A11Q9UPY5 501 aa11.24□□□□□ -0.61
VMP1-209ENST00000588915 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 CCDC182A6NF36 153 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 CALB2P22676 271 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 EDDM3BP56851 147 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 ESRRGP62508 458 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 SLC34A1Q06495 639 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 DYNC1I2Q13409 638 aaKnown RBP11.23□□□□□ -0.61
VMP1-209ENST00000588915 IL18R1Q13478 541 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 ZNF322Q6U7Q0 402 aaPredicted RBP11.23□□□□□ -0.61
VMP1-209ENST00000588915 Q6ZS46 218 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 CCDC54Q8NEL0 328 aa11.23□□□□□ -0.61
VMP1-209ENST00000588915 CANT1Q8WVQ1 401 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms