RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 IGHV2-70DA0A0C4DH43 119 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 OOEPA6NGQ2 149 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 H3BMQ9 156 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 P2RY10O00398 339 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 GABRPO00591 440 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 PTBP3O95758 552 aaKnown RBP9.61□□□□□ -0.87
RFX1-204ENST00000588885 TTRP02766 147 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 IGHV4-38-2P0DP08 117 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 ACKR3P25106 362 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 RPS11P62280 158 aaKnown RBP eCLIP9.61□□□□□ -0.87
RFX1-204ENST00000588885 PAX2Q02962 417 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 MZT1Q08AG7 82 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 GPR50Q13585 617 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 CTF1Q16619 201 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 DMRTC1Q5HYR2 192 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 USP43Q70EL4 1123 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 C11orf53Q8IXP5 236 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 ELMOD2Q8IZ81 293 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 C3orf56Q8N813 242 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 PLPP7Q8NBV4 271 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 OR1M1Q8NGA1 313 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 OR51A4Q8NGJ6 313 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 OR5AK2Q8NH90 309 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 RAB2BQ8WUD1 216 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 LRRC29Q8WV35 223 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 PIGCQ92535 297 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 C12orf43Q96C57 262 aaKnown RBP9.61□□□□□ -0.87
RFX1-204ENST00000588885 SEH1LQ96EE3 360 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 NUDT16L1Q9BRJ7 211 aaKnown RBP9.61□□□□□ -0.87
RFX1-204ENST00000588885 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 FAM192AQ9GZU8 254 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 COMMD4Q9H0A8 199 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 ZNF281Q9Y2X9 895 aa9.61□□□□□ -0.87
RFX1-204ENST00000588885 TRAV38-1A0A0B4J264 116 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 TRBV5-5A0A0J9YX44 114 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 KIR2DS1A0A191URI9 304 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 A0A1B0GW55 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 ACOD1A6NK06 481 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 C22orf46C9J442 243 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 CDIPTO14735 213 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 FSTL3O95633 263 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 UBCP0CG48 685 aaKnown RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L2P0CJ85 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L3P0CJ86 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L4P0CJ87 422 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L5P0CJ88 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L6P0CJ89 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L7P0CJ90 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 CFL1P23528 166 aaKnown RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 PSMA1P25786 263 aaKnown RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 SOX2P48431 317 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 TMBIM6P55061 237 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 FGF12P61328 243 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 VBP1P61758 197 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 PRDX4Q13162 271 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 TIMM50Q3ZCQ8 353 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 YIF1BQ5BJH7 314 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 FAM27D1Q5T7N8 215 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 CD200R1LQ6Q8B3 271 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4L9Q6RFH8 374 aaPredicted RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 RBMS3Q6XE24 437 aaKnown RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 TMEM91Q6ZNR0 172 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 COMMD2Q86X83 199 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 FAM90A1Q86YD7 464 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 GCSAMQ8N6F7 178 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 ZDHHC22Q8N966 263 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 CSNK2A3Q8NEV1 391 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 NDNFQ8TB73 568 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 TSEN15Q8WW01 171 aaKnown RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 OR14A2Q96R54 314 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 CCL13Q99616 98 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 MICU1Q9BPX6 476 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 MS4A7Q9GZW8 240 aaPredicted RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 RGCCQ9H4X1 137 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 TXNL4BQ9NX01 149 aaKnown RBP9.6□□□□□ -0.87
RFX1-204ENST00000588885 NDUFA13Q9P0J0 144 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 DUX4Q9UBX2 424 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 SSR3Q9UNL2 185 aa9.6□□□□□ -0.87
RFX1-204ENST00000588885 A0A1B0GTI1 187 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 TRDV1A0A1B0GX56 115 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 TNFRSF13BO14836 293 aaPredicted RBP9.59□□□□□ -0.87
RFX1-204ENST00000588885 SC5DO75845 299 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 LHBP01229 141 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 IGLV3-1P01715 115 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 TFF1P04155 84 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 CCL1P22362 96 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 CPT2P23786 658 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 BAMBIQ13145 260 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 SPCS2Q15005 226 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 TRAM1Q15629 374 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 KCNJ8Q15842 424 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 ACSM3Q53FZ2 586 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 FGFRL1Q8N441 504 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 OR5T2Q8NGG2 359 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 OR51E1Q8TCB6 317 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 FAM216AQ8WUB2 273 aa9.59□□□□□ -0.87
RFX1-204ENST00000588885 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms