RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MRPS26Q9BYN8 205 aaKnown RBP15.87■□□□□ 0.13
CLPTM1-209ENST00000588855 ZNF665Q9H7R5 613 aa15.87■□□□□ 0.13
CLPTM1-209ENST00000588855 SNTG1Q9NSN8 517 aa15.87■□□□□ 0.13
CLPTM1-209ENST00000588855 DNAJB11Q9UBS4 358 aa15.87■□□□□ 0.13
CLPTM1-209ENST00000588855 STUB1Q9UNE7 303 aa15.87■□□□□ 0.13
CLPTM1-209ENST00000588855 ARL6IP5O75915 188 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 NXPH2O95156 264 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 GYPAP02724 150 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 CD99P14209 185 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 MUC1P15941 1255 aaPredicted RBP15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 CD36P16671 472 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 SRMP19623 302 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 CALRP27797 417 aaKnown RBP15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 OR3A4PP47883 348 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 NPBWR2P48146 333 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 ERVK11-1P61568 191 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 MICBQ29980 383 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 LYPD2Q6UXB3 125 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 ACP7Q6ZNF0 438 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 OR51F2Q8NH61 342 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 TMIGD2Q96BF3 282 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 FAM192AQ9GZU8 254 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 OR51E2Q9H255 320 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 HES4Q9HCC6 221 aa15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 EXOSC4Q9NPD3 245 aaKnown RBP15.86■□□□□ 0.13
CLPTM1-209ENST00000588855 CYB5AP00167 134 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 TFF1P04155 84 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 ACAA1P09110 424 aaPredicted RBP15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 TMEM225BP0DP42 221 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 BCL3P20749 454 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 GALP22466 123 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 TMEM249Q2WGJ8 235 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 C22orf42Q6IC83 251 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 DCDC5Q6ZRR9 648 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 JAGN1Q8N5M9 183 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 NKAIN3Q8N8D7 197 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 OR5T2Q8NGG2 359 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 TNFAIP8L1Q8WVP5 186 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 SLITRK2Q9H156 845 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 PATZ1Q9HBE1 687 aaKnown RBP15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 SMURF1Q9HCE7 757 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 RBFOX1Q9NWB1 397 aaKnown RBP15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 NLKQ9UBE8 527 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 PCDHB10Q9UN67 800 aa15.85■□□□□ 0.13
CLPTM1-209ENST00000588855 F5H0A9 414 aaPredicted RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 TRAPPC2LH3BP13 241 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 INHBBP09529 407 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 RPS2P15880 293 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 GADD45AP24522 165 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 KCNJ8Q15842 424 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 SMIM21Q3B7S5 101 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 STUMQ69YW2 141 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 C1QL2Q7Z5L3 287 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 LYPD6Q86Y78 171 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 ZSCAN4Q8NAM6 433 aaPredicted RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 C12orf43Q96C57 262 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 RAB39BQ96DA2 213 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 YIPF6Q96EC8 236 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 TXNL4BQ9NX01 149 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 RASL12Q9NYN1 266 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.84■□□□□ 0.133e-8■■■■□ 20.6
CLPTM1-209ENST00000588855 SHISA3A0PJX4 238 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 FAM157AC9JC47 383 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 TNFRSF13BO14836 293 aaPredicted RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 SEC61A1P61619 476 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 SAXO1Q8IYX7 474 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 PNLDC1Q8NA58 520 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 EMG1Q92979 244 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 CHCHD6Q9BRQ6 235 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 CNTD2Q9H8S5 307 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 IL36RNQ9UBH0 155 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 CTSZQ9UBR2 303 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 SSR3Q9UNL2 185 aa15.84■□□□□ 0.13
CLPTM1-209ENST00000588855 ABCA1O95477 2261 aa15.83■□□□□ 0.13
CLPTM1-209ENST00000588855 DOCK11Q5JSL3 2073 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 A0A1B0GW55 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 MEGF11A6BM72 1044 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 OR2AT4A6NND4 320 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 ADAM20O43506 726 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 KDM4BO94953 1096 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 HEXAP06865 529 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 SFTPBP07988 381 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L2P0CJ85 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L3P0CJ86 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L4P0CJ87 422 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L5P0CJ88 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L6P0CJ89 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L7P0CJ90 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 IGHV4-31P0DP07 118 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 CALCBP10092 127 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 PSG2P11465 335 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 AMY2BP19961 511 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 FGF9P31371 208 aaPredicted RBP15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 PTGFRP43088 359 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 DUX4L9Q6RFH8 374 aaPredicted RBP15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 Q8IYB0 196 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 PXT1Q8NFP0 134 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 ANGPTL6Q8NI99 470 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 CCL13Q99616 98 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 GFI1Q99684 422 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms