RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 GHSRQ92847 366 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 OR51I2Q9H344 312 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 IGHV3OR16-10A0A075B7F0 116 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 FAM230AA0A1W2PPH8 454 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 CD2P06729 351 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 OCM2P0CE71 109 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 OCMP0CE72 109 aaPredicted RBP13.02□□□□□ -0.33
NCLN-203ENST00000587740 CELP19835 753 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 FUT6P51993 359 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 TMEM155Q4W5P6 130 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 FAM201AQ5SY85 155 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 C16orf87Q6PH81 154 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 ZNF573Q86YE8 665 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 OR5D14Q8NGL3 314 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 TRMT10AQ8TBZ6 339 aaKnown RBP13.02□□□□□ -0.33
NCLN-203ENST00000587740 NPRL2Q8WTW4 380 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 WFDC12Q8WWY7 111 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 BORCS8Q96FH0 119 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 MS4A7Q9GZW8 240 aaPredicted RBP13.02□□□□□ -0.33
NCLN-203ENST00000587740 PATZ1Q9HBE1 687 aaKnown RBP13.02□□□□□ -0.33
NCLN-203ENST00000587740 NEK6Q9HC98 313 aa13.02□□□□□ -0.33
NCLN-203ENST00000587740 LSM2Q9Y333 95 aaKnown RBP13.02□□□□□ -0.33
NCLN-203ENST00000587740 MDFIC2A0A1B0GVS7 189 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 PQLC2LA1A4F0 135 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 MRPS14O60783 128 aaKnown RBP13.01□□□□□ -0.33
NCLN-203ENST00000587740 FSTL3O95633 263 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 CD1AP06126 327 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 ATF1P18846 271 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 PRKACBP22694 351 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 CD80P33681 288 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 CFHR2P36980 270 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 HAAOP46952 286 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 SOX2P48431 317 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 PAX8Q06710 450 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 KCNJ8Q15842 424 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 YIF1BQ5BJH7 314 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 HAGHLQ6PII5 290 aaPredicted RBP13.01□□□□□ -0.33
NCLN-203ENST00000587740 C9orf139Q6ZV77 190 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 PARP16Q8N5Y8 322 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 KIR3DL3Q8N743 410 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 ZNF671Q8TAW3 534 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 RGP1Q92546 391 aaPredicted RBP13.01□□□□□ -0.33
NCLN-203ENST00000587740 PGLYRP3Q96LB9 341 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 ZCCHC4Q9H5U6 513 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
NCLN-203ENST00000587740 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
NCLN-203ENST00000587740 OOEPA6NGQ2 149 aa13□□□□□ -0.33
NCLN-203ENST00000587740 A8MXK9 166 aa13□□□□□ -0.33
NCLN-203ENST00000587740 F5H0A9 414 aaPredicted RBP13□□□□□ -0.33
NCLN-203ENST00000587740 C3orf80F5H4A9 247 aa13□□□□□ -0.33
NCLN-203ENST00000587740 LGALS8O00214 317 aa13□□□□□ -0.33
NCLN-203ENST00000587740 LHBP01229 141 aa13□□□□□ -0.33
NCLN-203ENST00000587740 MAP2K4P45985 399 aa13□□□□□ -0.33
NCLN-203ENST00000587740 RBP2P50120 134 aa13□□□□□ -0.33
NCLN-203ENST00000587740 ATP1B3P54709 279 aa13□□□□□ -0.33
NCLN-203ENST00000587740 PAX2Q02962 417 aa13□□□□□ -0.33
NCLN-203ENST00000587740 DOC2BQ14184 412 aa13□□□□□ -0.33
NCLN-203ENST00000587740 ZNF404Q494X3 552 aa13□□□□□ -0.33
NCLN-203ENST00000587740 HIST2H2BDQ6DRA6 164 aa13□□□□□ -0.33
NCLN-203ENST00000587740 SFRP4Q6FHJ7 346 aaPredicted RBP13□□□□□ -0.33
NCLN-203ENST00000587740 C19orf18Q8NEA5 215 aa13□□□□□ -0.33
NCLN-203ENST00000587740 DNAAF1Q8NEP3 725 aa13□□□□□ -0.33
NCLN-203ENST00000587740 OR13C9Q8NGT0 318 aa13□□□□□ -0.33
NCLN-203ENST00000587740 AQP3Q92482 292 aa13□□□□□ -0.33
NCLN-203ENST00000587740 TMEM106AQ96A25 262 aa13□□□□□ -0.33
NCLN-203ENST00000587740 TMEM246Q9BRR3 403 aa13□□□□□ -0.33
NCLN-203ENST00000587740 MRI1Q9BV20 369 aa13□□□□□ -0.33
NCLN-203ENST00000587740 IGKV1-9A0A0C4DH69 117 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 TRBV5-5A0A0J9YX44 114 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 SRRM5B3KS81 715 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 J3QT63 122 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 AKR7A2O43488 359 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 RHBDL1O75783 438 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 PLATP00750 562 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 HSMCR30P0CW71 290 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 AZGP1P25311 298 aaKnown RBP12.99□□□□□ -0.33
NCLN-203ENST00000587740 KRTAP10-3P60369 221 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 GMFBP60983 142 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
NCLN-203ENST00000587740 RELBQ01201 579 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 TBCEQ15813 527 aaPredicted RBP12.99□□□□□ -0.33
NCLN-203ENST00000587740 MICBQ29980 383 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 Q499Y3 187 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 LHFPL2Q6ZUX7 228 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 ANGPTL5Q86XS5 388 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 UFD1Q92890 307 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 OPALINQ96PE5 141 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 CITED1Q99966 193 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 ISYNA1Q9NPH2 558 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 MIOXQ9UGB7 285 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 POLDIP2Q9Y2S7 368 aa12.99□□□□□ -0.33
NCLN-203ENST00000587740 LRRC42Q9Y546 428 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms