RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GPR173Q9NS66 373 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 OR14J1Q9UGF5 321 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 NUFIP1Q9UHK0 495 aaKnown RBP9.5□□□□□ -0.89
BRCA1-225ENST00000586385 PITPNC1Q9UKF7 332 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 COPS3Q9UNS2 423 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 A0A1B0GTI1 187 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 TMEM82A0PJX8 343 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 CCDC182A6NF36 153 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 H3BN98 237 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 PRODHO43272 600 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 SNX3O60493 162 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 MMP23AO75900 390 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 DHRS3O75911 302 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 NXPH2O95156 264 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 AMY1AP04745 511 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 AMY2AP04746 511 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 PAICSP22234 425 aaKnown RBP9.49□□□□□ -0.89
BRCA1-225ENST00000586385 MS4A2Q01362 244 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 ROM1Q03395 351 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 COL10A1Q03692 680 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 GINS1Q14691 196 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 DEFB121Q5J5C9 76 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 ZNF684Q5T5D7 378 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 BAIAP2L2Q6UXY1 529 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 ETV3LQ6ZN32 361 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 ANGPTL5Q86XS5 388 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 OR13D1Q8NGV5 346 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 TTTY10Q9BZA0 68 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 REEP1Q9H902 201 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 ENPP5Q9UJA9 477 aa9.49□□□□□ -0.89
BRCA1-225ENST00000586385 IGHV2-26A0A0B4J1V2 119 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 A6NIN4 97 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 SH2D7A6NKC9 451 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-225ENST00000586385 F2RL2O00254 374 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 MAGEB4O15481 346 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-225ENST00000586385 PEX14O75381 377 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 PF4V1P10720 104 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 CD24P25063 80 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ACTA2P62736 377 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ACTG2P63267 376 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ACTC1P68032 377 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ACTA1P68133 377 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 SLC35A2P78381 396 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 CDK5Q00535 292 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 DYNC1I2Q13409 638 aaKnown RBP9.48□□□□□ -0.89
BRCA1-225ENST00000586385 SPATS1Q496A3 300 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 CLVS2Q5SYC1 327 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 MINOS1Q5TGZ0 78 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 DEGS2Q6QHC5 323 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 Q6ZSR3 168 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ASRGL1Q7L266 308 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ZNF573Q86YE8 665 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ASCC1Q8N9N2 400 aaKnown RBP9.48□□□□□ -0.89
BRCA1-225ENST00000586385 OR4P4Q8NGL7 312 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 OR14K1Q8NGZ2 314 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 GIPC3Q8TF64 312 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 ITFG2Q969R8 447 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 RCC1LQ96I51 464 aaKnown RBP9.48□□□□□ -0.89
BRCA1-225ENST00000586385 WWC2-AS2Q96NR7 200 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 YIPF3Q9GZM5 350 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 TAGLN3Q9UI15 199 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 LAMP5Q9UJQ1 280 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 SLC22A13Q9Y226 551 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 TSSC4Q9Y5U2 329 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-225ENST00000586385 MINOS1-NBL1R4GNA1 71 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 V9GYS6 101 aa9.48□□□□□ -0.89
BRCA1-225ENST00000586385 IGKV1-27A0A075B6S5 117 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 ARRDC5A6NEK1 342 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 MRPL3P09001 348 aaKnown RBP9.47□□□□□ -0.89
BRCA1-225ENST00000586385 EDDM3BP56851 147 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 OR12D2P58182 307 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 SLC34A1Q06495 639 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 APOFQ13790 326 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 SLC35D3Q5M8T2 416 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 TMEM236Q5W0B7 351 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 COMMD2Q86X83 199 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 ZNF679Q8IYX0 411 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 HS3ST5Q8IZT8 346 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 OR8H2Q8N162 312 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 TPRX1Q8N7U7 411 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 OR52N4Q8NGI2 321 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 ZNF714Q96N38 554 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 FAM107BQ9H098 131 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 MTCH1Q9NZJ7 389 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 IL36RNQ9UBH0 155 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 POLDIP2Q9Y2S7 368 aa9.47□□□□□ -0.89
BRCA1-225ENST00000586385 DLGAP1O14490 977 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 GSC2O15499 205 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 IGHA1P01876 353 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 PF4P02776 101 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 ALDOBP05062 364 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 LPLP06858 475 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 AZGP1P25311 298 aaKnown RBP9.46□□□□□ -0.9
BRCA1-225ENST00000586385 RPS7P62081 194 aaKnown RBP9.46□□□□□ -0.9
BRCA1-225ENST00000586385 IL24Q13007 206 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 ARSJQ5FYB0 599 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-225ENST00000586385 UTF1Q5T230 341 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms