RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 TRIM64CA6NLI5 447 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 ZNF701M0R085 212 aaPredicted RBP1.41□□□□□ -2.18
SKA2-210ENST00000584089 DFFAO00273 331 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 UPK1AO00322 258 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 TRDMT1O14717 391 aaKnown RBP1.41□□□□□ -2.18
SKA2-210ENST00000584089 PSCAO43653 123 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 CDK1P06493 297 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 CBR1P16152 277 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 PAX6P26367 422 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 LAMTOR4Q0VGL1 99 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 LGALSLQ3ZCW2 172 aaPredicted RBP1.41□□□□□ -2.18
SKA2-210ENST00000584089 THOC7Q6I9Y2 204 aaKnown RBP1.41□□□□□ -2.18
SKA2-210ENST00000584089 CLEC18BQ6UXF7 455 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 ZNF555Q8NEP9 628 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 ZFAND1Q8TCF1 268 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 GLYATL2Q8WU03 294 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 MRPL20Q9BYC9 149 aaKnown RBP1.41□□□□□ -2.18
SKA2-210ENST00000584089 CYP3A43Q9HB55 503 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 RAB23Q9ULC3 237 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 SBNO1A3KN83 1393 aa1.41□□□□□ -2.18
SKA2-210ENST00000584089 BRD4O60885 1362 aaPredicted RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 ZNF99A8MXY4 864 aaPredicted RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 SUPT3HB4E1H0 165 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 SLC31A1O15431 190 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 ZNF73O43830 326 aaPredicted RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 GCGP01275 180 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 CTSGP08311 255 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 ANXA8P13928 327 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 RPL10AP62906 217 aaKnown RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 ELOCQ15369 112 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 TTC32Q5I0X7 151 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 ANXA8L1Q5VT79 327 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 TTC19Q6DKK2 380 aaPredicted RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 AMN1Q8IY45 258 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 OR5P3Q8WZ94 311 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 SLC25A44Q96H78 314 aaPredicted RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 SPACA5Q96QH8 159 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 HIGD2AQ9BW72 106 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 IQCGQ9H095 443 aaKnown RBP1.4□□□□□ -2.19
SKA2-210ENST00000584089 TAC3Q9UHF0 121 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 PRO0628Q9UI54 55 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 KLF12Q9Y4X4 402 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 FBN3Q75N90 2809 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 MIA3Q5JRA6 1907 aa1.4□□□□□ -2.19
SKA2-210ENST00000584089 A0A1W2PNM2 257 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 KLK1P06870 262 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 FGF4P08620 206 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 HTR2BP41595 481 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 LGALS7P47929 136 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 ST3GAL4Q11206 333 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 CDNFQ49AH0 187 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 PLCXD3Q63HM9 321 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 CLEC2AQ6UVW9 174 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 OR2W3Q7Z3T1 314 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 VTCN1Q7Z7D3 282 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 LINC00337Q8N6G1 96 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 BPIFB6Q8NFQ5 453 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 OR4K2Q8NGD2 314 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 OR8S1Q8NH09 359 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 GPX8Q8TED1 209 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 BAALCQ8WXS3 180 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 OR8D1Q8WZ84 308 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 FXYD5Q96DB9 178 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 C20orf166-AS1Q96NR2 134 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 ARMC7Q9H6L4 198 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 RBM22Q9NW64 420 aaKnown RBP eCLIP1.39□□□□□ -2.19
SKA2-210ENST00000584089 ZNF443Q9Y2A4 671 aaPredicted RBP1.39□□□□□ -2.19
SKA2-210ENST00000584089 KLF13Q9Y2Y9 288 aaPredicted RBP1.39□□□□□ -2.19
SKA2-210ENST00000584089 ORC6Q9Y5N6 252 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 ZNF780BQ9Y6R6 833 aa1.39□□□□□ -2.19
SKA2-210ENST00000584089 ZNF729A6NN14 1252 aaPredicted RBP1.38□□□□□ -2.19
SKA2-210ENST00000584089 LEUTXA8MZ59 168 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 K7EPK0 472 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 K7ERS5 55 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 RGS5O15539 181 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 OR2A4O95047 310 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 TRGV3P03979 118 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 GABRR2P28476 465 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 HCCSP53701 268 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 SLC18A1P54219 525 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 PMVKQ15126 192 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 RAB11BQ15907 218 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 MLIPQ5VWP3 458 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 ULK3Q6PHR2 472 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 MRPL21Q7Z2W9 205 aaKnown RBP1.38□□□□□ -2.19
SKA2-210ENST00000584089 PRNTQ86SH4 94 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 CYP4Z2PQ8N1L4 340 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 PIH1D2Q8WWB5 315 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 TNFRSF14Q92956 283 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 SMIM8Q96KF7 97 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 OR2A7Q96R45 310 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 TMED9Q9BVK6 235 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 TSGA10Q9BZW7 698 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 C8orf33Q9H7E9 229 aaPredicted RBP1.38□□□□□ -2.19
SKA2-210ENST00000584089 C6orf50Q9HD87 102 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 TFR2Q9UP52 801 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 ICE1Q9Y2F5 2266 aa1.38□□□□□ -2.19
SKA2-210ENST00000584089 IGHV3-21A0A0B4J1V1 117 aa1.37□□□□□ -2.19
SKA2-210ENST00000584089 PMCHP20382 165 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms