RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	RELA	Q04206	551 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	EGR3	Q06889	387 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	NSUN5P2	Q63ZY6	315 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	ABHD3	Q8WU67	409 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	GPX7	Q96SL4	187 aa	Predicted RBP	10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	ZNF385D	Q9H6B1	395 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	PIK3C2A	O00443	1686 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	KNL1	Q8NG31	2342 aa		10.1	□□□□□ -0.79
MSI2-217	ENST00000583705	MASP2	O00187	686 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	TBX19	O60806	448 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	CD3D	P04234	171 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	THBS4	P35443	961 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	RPS4X	P62701	263 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	C4orf45	Q96LM5	186 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	RPP25	Q9BUL9	199 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	LMO7DN	F2Z398	122 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	MAGEA5	P43359	124 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	OR1N2	Q8NGR9	330 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	GSTZ1	O43708	216 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	TGFBR1	P36897	503 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	GALR1	P47211	349 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	FMOD	Q06828	376 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	GEMIN2	O14893	280 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	ZNF324	O75467	553 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	S100A8	P05109	93 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	UQCRFS1	P47985	274 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	PABPC1L2A	Q5JQF8	200 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	FAM162B	Q5T6X4	162 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	CLEC9A	Q6UXN8	241 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	FKBP11	Q9NYL4	201 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	CES1P1	Q9UKY3	287 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	IGHV5-51	A0A0C4DH38	117 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	CD82	P27701	267 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	DUSP8	Q13202	625 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	SLC17A1	Q14916	467 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	PDPN	Q86YL7	162 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	OR8I2	Q8N0Y5	310 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	DCTN5	Q9BTE1	182 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	OR2J1	Q9GZK6	312 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	MOB4	Q9Y3A3	225 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	AKAP12	Q02952	1782 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705		A0A1B0GVG6	124 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	NTN1	O95631	604 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	TCL1A	P56279	114 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	ZNF547	Q8IVP9	402 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	EIF4E3	Q8N5X7	224 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	TMEM37	Q8WXS4	190 aa		10.09	□□□□□ -0.79
MSI2-217	ENST00000583705	RER1	O15258	196 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CTSL	P07711	333 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	HTN3	P15516	51 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	PPOX	P50336	477 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	ZNF154	Q13106	437 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	AQP6	Q13520	282 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	PRSS8	Q16651	343 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	TRAT1	Q6PIZ9	186 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	SHISA4	Q96DD7	197 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	RBFOX1	Q9NWB1	397 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	NEURL4	Q96JN8	1562 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	PSMB6	P28072	239 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	ZNF137P	P52743	207 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	SLC37A1	P57057	533 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	ABI3BP	Q7Z7G0	1075 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	DND1	Q8IYX4	353 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	NUP188	Q5SRE5	1749 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	OTOF	Q9HC10	1997 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	IGKV3-20	P01619	116 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CRISP2	P16562	243 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	OR3A1	P47881	315 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CEBPE	Q15744	281 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705		Q6ZN92	141 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CXXC4	Q9H2H0	198 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	SVIL	O95425	2214 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	MELTF	P08582	738 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	PTGFR	P43088	359 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CLDN10	P78369	228 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	PJVK	Q0ZLH3	352 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	ALKAL1	Q6UXT8	129 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	MTCH2	Q9Y6C9	303 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	NUP98	P52948	1817 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705		A0A0A6YYJ9	748 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	ZNF32	P17041	273 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CALCR	P30988	508 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	CCR2	P41597	374 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	IL11RA	Q14626	422 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	DOLPP1	Q86YN1	238 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	LRP12	Q9Y561	859 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	GIP	P09681	153 aa	Predicted RBP	10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	VDAC1	P21796	283 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	RPS19	P39019	145 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	ID1	P41134	155 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	C11orf91	Q3C1V1	193 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	FAM222B	Q8WU58	562 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	KCNE3	Q9Y6H6	103 aa		10.08	□□□□□ -0.8
MSI2-217	ENST00000583705	AFMID	Q63HM1	303 aa		10.07	□□□□□ -0.8
MSI2-217	ENST00000583705	OR8A1	Q8NGG7	326 aa		10.07	□□□□□ -0.8
MSI2-217	ENST00000583705		A0A087WUJ7	227 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms