RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 MTCH1Q9NZJ7 389 aa16.77■□□□□ 0.28
TOP3A-213ENST00000582230 NLKQ9UBE8 527 aa16.77■□□□□ 0.28
TOP3A-213ENST00000582230 IGHV3OR15-7A0A075B7D8 119 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 TRDV1A0A1B0GX56 115 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 TRAPPC2LH3BP13 241 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 TNFRSF13BO14836 293 aaPredicted RBP16.76■□□□□ 0.27
TOP3A-213ENST00000582230 MAS1P04201 325 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 WNT2P09544 360 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 TMEM225BP0DP42 221 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 JUNBP17275 347 aaPredicted RBP16.76■□□□□ 0.27
TOP3A-213ENST00000582230 GP2P55259 537 aaKnown RBP16.76■□□□□ 0.27
TOP3A-213ENST00000582230 ZP1P60852 638 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 FAM27D1Q5T7N8 215 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 CRIP3Q6Q6R5 217 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 ACP7Q6ZNF0 438 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 PNLDC1Q8NA58 520 aaKnown RBP16.76■□□□□ 0.27
TOP3A-213ENST00000582230 ZNF488Q96MN9 340 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 DNTTIP1Q9H147 329 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 HES4Q9HCC6 221 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 ITPR3Q14573 2671 aa16.76■□□□□ 0.27
TOP3A-213ENST00000582230 F5H0A9 414 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-213ENST00000582230 SPRY1O43609 319 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-213ENST00000582230 GYPAP02724 150 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 IGHV4-31P0DP07 118 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 RPS2P15880 293 aaKnown RBP16.75■□□□□ 0.27
TOP3A-213ENST00000582230 ATPAF1Q5TC12 328 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-213ENST00000582230 STUMQ69YW2 141 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 CYB5R2Q6BCY4 276 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 RNF144BQ7Z419 303 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 BIVMQ86UB2 503 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 PXT1Q8NFP0 134 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 OR5D18Q8NGL1 313 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 SEH1LQ96EE3 360 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 NEIL1Q96FI4 390 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-213ENST00000582230 PPIL3Q9H2H8 161 aaKnown RBP16.75■□□□□ 0.27
TOP3A-213ENST00000582230 KAAG1Q9UBP8 84 aa16.75■□□□□ 0.27
TOP3A-213ENST00000582230 AKAP9Q99996 3911 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 OR2AT4A6NND4 320 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 B4DSR2 109 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 KDM4BO94953 1096 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 PTGFRP43088 359 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 LYPD2Q6UXB3 125 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 SLC36A1Q7Z2H8 476 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 LINC01356Q8N9X3 169 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 OR8B3Q8NGG8 313 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 TNFAIP8L1Q8WVP5 186 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 FOXRED1Q96CU9 486 aaPredicted RBP16.74■□□□□ 0.27
TOP3A-213ENST00000582230 OR8B2Q96RD0 313 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 SMURF1Q9HCE7 757 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 SNTG1Q9NSN8 517 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 STUB1Q9UNE7 303 aa16.74■□□□□ 0.27
TOP3A-213ENST00000582230 MAGEA13PA6NCF6 341 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 ADAM20O43506 726 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 ANGPTL7O43827 346 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 KNG1P01042 644 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 ESCO2Q56NI9 601 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 FIP1L1Q6UN15 594 aaKnown RBP16.73■□□□□ 0.27
TOP3A-213ENST00000582230 ASCL4Q6XD76 172 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 LRRTM1Q86UE6 522 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 JAGN1Q8N5M9 183 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 OR5T2Q8NGG2 359 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 ANGPTL6Q8NI99 470 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 MSI2Q96DH6 328 aaKnown RBP16.73■□□□□ 0.27
TOP3A-213ENST00000582230 MED30Q96HR3 178 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 UQCC2Q9BRT2 126 aa16.73■□□□□ 0.27
TOP3A-213ENST00000582230 IGKV1-12A0A0C4DH73 117 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 NKX6-3A6NJ46 265 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 FAM157AC9JC47 383 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 TMPRSS2O15393 492 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 IGKV1D-12P01611 117 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 SMIM18P0DKX4 95 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 PSG2P11465 335 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 CD36P16671 472 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 BCL3P20749 454 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 CALRP27797 417 aaKnown RBP16.72■□□□□ 0.27
TOP3A-213ENST00000582230 FGF9P31371 208 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-213ENST00000582230 NPBWR2P48146 333 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 PITPNBP48739 271 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 NPY4RP50391 375 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 BMXP51813 675 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 GLT8D1Q68CQ7 371 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 FAM58AQ8N1B3 248 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 EMG1Q92979 244 aaKnown RBP16.72■□□□□ 0.27
TOP3A-213ENST00000582230 S100A13Q99584 98 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 CCL13Q99616 98 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 MRPS26Q9BYN8 205 aaKnown RBP16.72■□□□□ 0.27
TOP3A-213ENST00000582230 FAM192AQ9GZU8 254 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 SSR3Q9UNL2 185 aa16.72■□□□□ 0.27
TOP3A-213ENST00000582230 IGKV1D-17A0A075B6S4 117 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 TRAV1-2A0A0B4J238 106 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 RFPL4AA6NLU0 287 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 RFPL4AL1F8VTS6 287 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 F8VVB4 439 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 F8VWA3 439 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 CD5LO43866 347 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 FOXH1O75593 365 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 MSMBP08118 114 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 ADRA2CP18825 462 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 OR3A4PP47883 348 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 RSU1Q15404 277 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms