RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 ZNF233A6NK53 670 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 H0Y9J4 135 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 TM9SF1O15321 606 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 FGF16O43320 207 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CXCL13O43927 109 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 RAMP1O60894 148 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CLDN11O75508 207 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 SERF1AO75920 110 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 ASS1P00966 412 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 TNNC2P02585 160 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 ORM1P02763 201 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CD74P04233 296 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 HSPB1P04792 205 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 BCKDHAP12694 445 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 TDGF1P13385 188 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 HMGA1P17096 107 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 PSMB1P20618 241 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 CCNE1P24864 410 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 GRPRP30550 384 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CXCL12P48061 93 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 AQP5P55064 265 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 DIO3P55073 304 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 OR2B8PP59922 312 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 SPCS3P61009 180 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 RPL8P62917 257 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 NDUFA9Q16795 377 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 OR2G6Q5TZ20 316 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 ANKRD26P1Q6NSI1 321 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 DRAM2Q6UX65 266 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CASP12Q6UXS9 341 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 C12orf54Q6X4T0 127 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CMC1Q7Z7K0 106 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 TMEM150AQ86TG1 271 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 TRAPPC5Q8IUR0 188 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 EID2Q8N6I1 236 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 WDR31Q8NA23 367 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 FAM172AQ8WUF8 416 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 IFT81Q8WYA0 676 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 ANKRD36BP1Q96IX9 119 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CEP19Q96LK0 163 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 TBX15Q96SF7 602 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 PKMYT1Q99640 499 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 EBNA1BP2Q99848 306 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 PRRT1Q99946 306 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 UGT2B28Q9BY64 529 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 NMUR2Q9GZQ4 415 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 RBKSQ9H477 322 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 ZNF702PQ9H963 129 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 RDH14Q9HBH5 336 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 C19orf12Q9NSK7 152 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 MCUBQ9NWR8 336 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 HRASLS2Q9NWW9 162 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 GPR179Q6PRD1 2367 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 DOCK6Q96HP0 2047 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 EP300Q09472 2414 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 CFAP54Q96N23 3096 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 CITO14578 2027 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 PTPRJQ12913 1337 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 IGHV2-70DA0A0C4DH43 119 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 PVALEFA0A1B0GWK0 134 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 A0A1W2PQ67 120 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 TSPAN11A1L157 253 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 E9PLD3 99 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 CDX4O14627 284 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 HCRTO43612 131 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 SHOX2O60902 331 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 UGT2B17O75795 530 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 TRAPPC6AO75865 159 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 H2AFXP16104 143 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 UGT2B7P16662 529 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 WARSP23381 471 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 FGF9P31371 208 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 GLP1RP43220 463 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 EMDP50402 254 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 RAB7AP51149 207 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 UGT2B15P54855 530 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 CLDN6P56747 220 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 SNRPFP62306 86 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 RANP62826 216 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 RPL31P62899 125 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 RPL32P62910 135 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 SKP2Q13309 424 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 DPYSL3Q14195 570 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 KCNJ11Q14654 390 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 OXA1LQ15070 435 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 PDGFRLQ15198 375 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 PSG5Q15238 335 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 SNRNP35Q16560 246 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 RBM48Q5RL73 367 aaKnown RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 FAM120AOSQ5T036 256 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 RESP18Q5W5W9 173 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 NIPAL1Q6NVV3 410 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 FAM199XQ6PEV8 388 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 Q6ZS52 159 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 SLC51BQ86UW2 128 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 CALHM1Q8IU99 346 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 RIBC1Q8N443 379 aaPredicted RBP3.07□□□□□ -1.92
NF1-220ENST00000581113 BPIFB2Q8N4F0 458 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 ARRDC1Q8N5I2 433 aa3.07□□□□□ -1.92
NF1-220ENST00000581113 C14orf178Q8N769 122 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms