RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
SS18-216ENST00000580751 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 ZSCAN4Q8NAM6 433 aaPredicted RBP13.08□□□□□ -0.32
SS18-216ENST00000580751 OR52N4Q8NGI2 321 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 OR6Q1Q8NGQ2 317 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 PTX4Q96A99 478 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 BORCS8Q96FH0 119 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 WDFY2Q96P53 400 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 TSC22D3Q99576 134 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 BPESC1Q9GZL8 116 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 SMURF1Q9HCE7 757 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 PCDHB16Q9NRJ7 776 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 UFSP2Q9NUQ7 469 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 RABL2AQ9UBK7 228 aaPredicted RBP13.08□□□□□ -0.32
SS18-216ENST00000580751 SPATA2Q9UM82 520 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 RABL2BQ9UNT1 228 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 HIVEP1P15822 2718 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 ACANP16112 2415 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 LRP5LA4QPB2 252 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 VWC2LB2RUY7 222 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 TPPPO94811 219 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 BPNT1O95861 308 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 GPM6AP51674 278 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 MTCP1P56278 107 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 CAV3P56539 151 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 MPPED2Q15777 294 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 WDR86Q86TI4 376 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 JAGN1Q8N5M9 183 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 S100ZQ8WXG8 99 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 RAB1CQ92928 201 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 POM121Q96HA1 1249 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 C6orf62Q9GZU0 229 aaPredicted RBP13.07□□□□□ -0.32
SS18-216ENST00000580751 TLNRD1Q9H1K6 362 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 RHOFQ9HBH0 211 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 C1orf123Q9NWV4 160 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 DYSFO75923 2080 aa13.07□□□□□ -0.32
SS18-216ENST00000580751 PQLC2LA1A4F0 135 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 ZNF732B4DXR9 585 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 TMEM178BH3BS89 294 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 ZNF780AO75290 641 aaPredicted RBP13.06□□□□□ -0.32
SS18-216ENST00000580751 BMXP51813 675 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 GPR176Q14439 515 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 ASCL4Q6XD76 172 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 SLC25A28Q96A46 364 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 REG4Q9BYZ8 158 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 FGF23Q9GZV9 251 aaPredicted RBP13.06□□□□□ -0.32
SS18-216ENST00000580751 CNTD2Q9H8S5 307 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
SS18-216ENST00000580751 F8P00451 2351 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 hCG_1807616A0A1W2PRN6 198 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 RNF223E7ERA6 249 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 APOA1P02647 267 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 ARSBP15848 533 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 RAB6AP20340 208 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
SS18-216ENST00000580751 PTBP1P26599 531 aaKnown RBP eCLIP13.05□□□□□ -0.32
SS18-216ENST00000580751 PMELP40967 661 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 ETV6P41212 452 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 PTGFRP43088 359 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 HES5Q5TA89 166 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 METAP1DQ6UB28 335 aaPredicted RBP13.05□□□□□ -0.32
SS18-216ENST00000580751 OR2W3Q7Z3T1 314 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 LRRC28Q86X40 367 aaPredicted RBP13.05□□□□□ -0.32
SS18-216ENST00000580751 PXT1Q8NFP0 134 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 TRMT10AQ8TBZ6 339 aaKnown RBP13.05□□□□□ -0.32
SS18-216ENST00000580751 RAB40AQ8WXH6 277 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 FAM3DQ96BQ1 224 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 GPER1Q99527 375 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 OR51I2Q9H344 312 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 IL36GQ9NZH8 169 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 WIPI2Q9Y4P8 454 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
SS18-216ENST00000580751 FAM230AA0A1W2PPH8 454 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 SMIM30A4D0T7 59 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 H7C1Q1 480 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 CDIPTO14735 213 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 SCGNO76038 276 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 FSTL3O95633 263 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
SS18-216ENST00000580751 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
SS18-216ENST00000580751 SLC2A2P11168 524 aaPredicted RBP13.04□□□□□ -0.32
SS18-216ENST00000580751 CFHR2P36980 270 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 BTG1P62324 171 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 LOXL1Q08397 574 aaPredicted RBP13.04□□□□□ -0.32
SS18-216ENST00000580751 DMRTC1Q5HYR2 192 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 AVPI1Q5T686 147 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 WDR82Q6UXN9 313 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 ANGPTL5Q86XS5 388 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 OR10Z1Q8NGY1 313 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 NPRL2Q8WTW4 380 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 MRPS24Q96EL2 167 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms