RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MED30Q96HR3 178 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 C4orf36Q96KX1 117 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 CNBD2Q96M20 576 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ALG8Q9BVK2 526 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 FAM234AQ9H0X4 552 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 OR10A2Q9H208 303 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 RASSF4Q9H2L5 321 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 NUFIP1Q9UHK0 495 aaKnown RBP10.99□□□□□ -0.65
TRAF4-214ENST00000580073 GNG8Q9UK08 70 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 OR52A1Q9UKL2 312 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 RAB26Q9ULW5 256 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 DIMT1Q9UNQ2 313 aaKnown RBP10.99□□□□□ -0.65
TRAF4-214ENST00000580073 MPC1Q9Y5U8 109 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 VWFP04275 2813 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 CMYA5Q8N3K9 4069 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 IGHV3OR15-7A0A075B7D8 119 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 ACOD1A6NK06 481 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 LOC110117498-PIK3R3F6TDL0 507 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 M0R1W7 72 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 SLC1A7O00341 560 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 TSPAN15O95858 294 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 LALBAP00709 142 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 WDR82Q6UXN9 313 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 C1orf122Q6ZSJ8 110 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 AHSA2Q719I0 299 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 PDZD9Q8IXQ8 264 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 RDH10Q8IZV5 341 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 H1FXQ92522 213 aaKnown RBP10.98□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF184Q99676 751 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-214ENST00000580073 DCTN5Q9BTE1 182 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 FGF23Q9GZV9 251 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-214ENST00000580073 TLNRD1Q9H1K6 362 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 METTL8Q9H825 291 aaKnown RBP10.98□□□□□ -0.65
TRAF4-214ENST00000580073 SIRT7Q9NRC8 400 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 FRRS1LQ9P0K9 344 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF391Q9UJN7 358 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 SIRT4Q9Y6E7 314 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-214ENST00000580073 NOTCH1P46531 2555 aa10.98□□□□□ -0.65
TRAF4-214ENST00000580073 A0A0U1RQV5 110 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 A0A1W2PPH5 198 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 H3BSH0 61 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 DENRO43583 198 aaKnown RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 DCKP27707 260 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 GABRA5P31644 462 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 HSPA13P48723 471 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 UBE2E1P51965 193 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 GTF2A1P52655 376 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 IKZF1Q13422 519 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 HERPUD1Q15011 391 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 ODF4Q2M2E3 257 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF829Q3KNS6 432 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 STUMQ69YW2 141 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 FDX2Q6P4F2 183 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 REC114Q7Z4M0 266 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 FAM216BQ8N7L0 139 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 OR5D13Q8NGL4 314 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 OR4C13Q8NGP0 309 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 OR2G2Q8NGZ5 317 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 ITFG2Q969R8 447 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 TMEM80Q96HE8 168 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 CCL13Q99616 98 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 RANBP3Q9H6Z4 567 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 GPR84Q9NQS5 396 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 INPP5EQ9NRR6 644 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 CNOT2Q9NZN8 540 aaKnown RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 SLC25A10Q9UBX3 287 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-214ENST00000580073 GTF2A1LQ9UNN4 478 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 RHBDD3Q9Y3P4 386 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 SNX5Q9Y5X3 404 aa10.97□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF816-ZNF321PA0A0X1KG74 233 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 EFCAB10A6NFE3 127 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 PTGES3LE9PB15 166 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 RNASEK-C17orf49H0YIS7 233 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 SAA4P35542 130 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 CAV3P56539 151 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 HOXA4Q00056 320 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-214ENST00000580073 DMRTC1Q5HYR2 192 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 BCL2L15Q5TBC7 163 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 ATPAF1Q5TC12 328 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-214ENST00000580073 LIAT1Q6ZQX7 453 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 Q6ZSR3 168 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 KCTD20Q7Z5Y7 419 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 SYS1Q8N2H4 156 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 OR14K1Q8NGZ2 314 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 OR10AC1Q8NH08 325 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 FAM110DQ8TAY7 271 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-214ENST00000580073 DUSP21Q9H596 190 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 FBLN5Q9UBX5 448 aa10.96□□□□□ -0.65
TRAF4-214ENST00000580073 PRKDCP78527 4128 aaKnown RBP10.95□□□□□ -0.66
TRAF4-214ENST00000580073 TRBV23-1A0A0A0MS06 115 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 A6NIN4 97 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 OR4C45A6NMZ5 311 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 CDIPTO14735 213 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 CDK1P06493 297 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 HTR1AP08908 422 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 CCL1P22362 96 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms