RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 METTL9Q9H1A3 318 aa11.65□□□□□ -0.54
LINC01543-201ENST00000578367 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
LINC01543-201ENST00000578367 PDZD2O15018 2839 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 LOC100506127A0A0U1RQW1 187 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SLC17A2O00624 439 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SLC22A1O15245 554 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SYNGR1O43759 233 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 RHBDL1O75783 438 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 KNG1P01042 644 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 IL1AP01583 271 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 LOXL1Q08397 574 aaPredicted RBP11.64□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF404Q494X3 552 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 DMRTC1Q5HYR2 192 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 NHLRC3Q5JS37 347 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SPIN3Q5JUX0 258 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SPNS3Q6ZMD2 512 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 DCDC5Q6ZRR9 648 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 RAB2BQ8WUD1 216 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SPACA5Q96QH8 159 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 CNTD2Q9H8S5 307 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 TMEM165Q9HC07 324 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 SMURF1Q9HCE7 757 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 NDUFA13Q9P0J0 144 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 GLS2Q9UI32 602 aa11.64□□□□□ -0.55
LINC01543-201ENST00000578367 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 IGHV4-30-2A0A087WSY4 118 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 NOTOA8MTQ0 251 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 AIPO00170 330 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 AKR7A2O43488 359 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 NXPH2O95156 264 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 BPNT1O95861 308 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 USF1P22415 310 aaPredicted RBP11.63□□□□□ -0.55
LINC01543-201ENST00000578367 HTR2CP28335 458 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 SCAND1P57086 179 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF146Q15072 292 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 RSU1Q15404 277 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 FAM189A2Q15884 450 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 DGUOKQ16854 277 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 ACP7Q6ZNF0 438 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 TGIF2LYQ8IUE0 185 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 OR51T1Q8NGJ9 327 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 RAB39BQ96DA2 213 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 CENPOQ9BU64 300 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 TREM2Q9NZC2 230 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 NLKQ9UBE8 527 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 DNAJB11Q9UBS4 358 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 FBLN5Q9UBX5 448 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 MIOXQ9UGB7 285 aa11.63□□□□□ -0.55
LINC01543-201ENST00000578367 MRPS28Q9Y2Q9 187 aaKnown RBP11.63□□□□□ -0.55
LINC01543-201ENST00000578367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.62□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF701M0R085 212 aaPredicted RBP11.62□□□□□ -0.55
LINC01543-201ENST00000578367 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
LINC01543-201ENST00000578367 GPR37O15354 613 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
LINC01543-201ENST00000578367 CSTBP04080 98 aaKnown RBP11.62□□□□□ -0.55
LINC01543-201ENST00000578367 SDC2P34741 201 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 FGF12P61328 243 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 BLMHQ13867 455 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 ZMYND11Q15326 602 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 AWAT2Q6E213 333 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 SLC16A12Q6ZSM3 486 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 SLC36A1Q7Z2H8 476 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 OR2W3Q7Z3T1 314 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 FAM58AQ8N1B3 248 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 SLAMF9Q96A28 289 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 RFT1Q96AA3 541 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 MED30Q96HR3 178 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 Q96MF0 132 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 GAL3ST1Q99999 423 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 FAM192AQ9GZU8 254 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 CST11Q9H112 138 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 PLGRKTQ9HBL7 147 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 HMG20AQ9NP66 347 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 DCAF16Q9NXF7 216 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 STEAP1Q9UHE8 339 aa11.62□□□□□ -0.55
LINC01543-201ENST00000578367 AK6Q9Y3D8 172 aaKnown RBP11.62□□□□□ -0.55
LINC01543-201ENST00000578367 A0A096LNT2 108 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 IGKV1-12A0A0C4DH73 117 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A10PA6NDY2 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A18PA6NE21 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A16PA6NEW6 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A20PA6NIJ5 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A8PA6NJQ4 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A7PA6NKC0 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 IFITM5A6NNB3 132 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A22PA8MWA6 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A12PA8MX19 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A5PA8MXJ8 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A23PA8MXZ1 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 SPRY1O43609 319 aaPredicted RBP11.61□□□□□ -0.55
LINC01543-201ENST00000578367 IGKV1D-12P01611 117 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A15PP0C7V4 464 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms