RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TGM4P49221 684 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 HCCSP53701 268 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 GRB2P62993 217 aaKnown RBP5.09□□□□□ -1.59
NUP88-212ENST00000576708 PRDX4Q13162 271 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 DGUOKQ16854 277 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 MICBQ29980 383 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 MICAQ29983 383 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 CDONQ4KMG0 1287 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 STUMQ69YW2 141 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 ASPHD2Q6ICH7 369 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 OR2T5Q6IEZ7 315 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 RAB12Q6IQ22 244 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 Q6ZSV7 163 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 PIGWQ7Z7B1 504 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 LDLRAD3Q86YD5 345 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 TIGD4Q8IY51 512 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 BBS1Q8NFJ9 593 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 OR2T33Q8NG76 320 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 OR10G2Q8NGC3 310 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 OR2T29Q8NH02 315 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 LINC01006Q8NI28 216 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 THEM6Q8WUY1 208 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 SSMEM1Q8WWF3 244 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 H1FXQ92522 213 aaKnown RBP5.09□□□□□ -1.59
NUP88-212ENST00000576708 PIGCQ92535 297 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 LYZL4Q96KX0 146 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 GAFA1Q96PS6 74 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 FEVQ99581 238 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 RBM4BQ9BQ04 359 aaKnown RBP5.09□□□□□ -1.59
NUP88-212ENST00000576708 PAPOLGQ9BWT3 736 aaKnown RBP5.09□□□□□ -1.59
NUP88-212ENST00000576708 DGCR6LQ9BY27 220 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 OR51V1Q9H2C8 321 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 REEP1Q9H902 201 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 RNPEPL1Q9HAU8 725 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 TRIM36Q9NQ86 728 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 CMC2Q9NRP2 79 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 HAO2Q9NYQ3 351 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 KIF17Q9P2E2 1029 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 KAAG1Q9UBP8 84 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 PRPF19Q9UMS4 504 aaKnown RBP5.09□□□□□ -1.59
NUP88-212ENST00000576708 ARL2BPQ9Y2Y0 163 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 POMT1Q9Y6A1 747 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 DOCK11Q5JSL3 2073 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TRGV11A0A075B6L2 103 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 ZNF816-ZNF321PA0A0X1KG74 233 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 A0A1B0GUS0 222 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 H3BN98 237 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 PSMD9O00233 223 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 NPFFO15130 113 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 NDUFB3O43676 98 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 RHBDL1O75783 438 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 GLCEO94923 617 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 ECDO95905 644 aaPredicted RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 IFNGP01579 166 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 MUC1P15941 1255 aaPredicted RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 ZNF3P17036 446 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TMEM11P17152 192 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 PRKACGP22612 351 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 NAA10P41227 235 aaPredicted RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 SLC15A1P46059 708 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 PROK1P58294 105 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 RPS7P62081 194 aaKnown RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 MZT1Q08AG7 82 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 DYRK1AQ13627 763 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 GINS1Q14691 196 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TMEM236Q5W0B7 351 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 LCN8Q6JVE9 175 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 WDR73Q6P4I2 378 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 KCTD8Q6ZWB6 473 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 SLC36A1Q7Z2H8 476 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 DHFR2Q86XF0 187 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 ADGRG5Q8IZF4 528 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 HS3ST5Q8IZT8 346 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 GALNT4Q8N4A0 578 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 OR8B12Q8NGG6 310 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 FAM110DQ8TAY7 271 aaPredicted RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 TEX47Q8TBZ9 253 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 GIPC3Q8TF64 312 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 HPSE2Q8WWQ2 592 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 OR5P3Q8WZ94 311 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 DYRK2Q92630 601 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 RORBQ92753 470 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TNFRSF14Q92956 283 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 NSL1Q96IY1 281 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 RNF170Q96K19 258 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 RAB3IPQ96QF0 476 aaPredicted RBP5.08□□□□□ -1.6
NUP88-212ENST00000576708 PKP2Q99959 881 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 MICU1Q9BPX6 476 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 DCTN5Q9BTE1 182 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TTTY10Q9BZA0 68 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TLNRD1Q9H1K6 362 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 TOR3AQ9H497 397 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 OPA3Q9H6K4 179 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 MAGIXQ9H6Y5 334 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 SP140LQ9H930 580 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 EXTL2Q9UBQ6 330 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 AASSQ9UDR5 926 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 ZNF391Q9UJN7 358 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 BAIAP2Q9UQB8 552 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms