RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SRP14P37108 136 aaKnown RBP7.13□□□□□ -1.27
SMG6-216ENST00000575176 NPBWR2P48146 333 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 DLX6P56179 175 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 CAV3P56539 151 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 GMFBP60983 142 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 SLC34A1Q06495 639 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 KCNJ8Q15842 424 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 TMEM244Q5VVB8 128 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 TTC23Q5W5X9 447 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 RUSC1-AS1Q66K80 236 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 DMKNQ6E0U4 476 aaPredicted RBP7.13□□□□□ -1.27
SMG6-216ENST00000575176 KCTD8Q6ZWB6 473 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 LYPD6Q86Y78 171 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 PIP4P2Q8N4L2 257 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 DHRSXQ8N5I4 330 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 KIR3DL3Q8N743 410 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 ZNRF1Q8ND25 227 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 OR51A2Q8NGJ7 313 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 OR13C5Q8NGS8 318 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 OR52N1Q8NH53 320 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 NANPQ8TBE9 248 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 PP6455Q8WZ26 134 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 Q96MT0 163 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 WDFY2Q96P53 400 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 UNKLQ9H9P5 680 aaKnown RBP7.13□□□□□ -1.27
SMG6-216ENST00000575176 C19orf12Q9NSK7 152 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 NUP50Q9UKX7 468 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 HHLA2Q9UM44 414 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 PCDHGB1Q9Y5G3 927 aa7.13□□□□□ -1.27
SMG6-216ENST00000575176 IGHV3OR16-10A0A075B7F0 116 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 A0A0A6YYJ9 748 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 TMEM82A0PJX8 343 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ERICH4A6NGS2 130 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 DNAJC9-AS1A6NH13 148 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 TMEM212A6NML5 194 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 RNASEK-C17orf49H0YIS7 233 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 H0YJX3 145 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ALX3O95076 343 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 IFNA2P01563 188 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 IGFBP3P17936 291 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 ATF1P18846 271 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 DCKP27707 260 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 C21orf33P30042 268 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 ATP6V1E1P36543 226 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 GP2P55259 537 aaKnown RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 IL13RA1P78552 427 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 PRB3Q04118 309 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 IKZF1Q13422 519 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 IRF3Q14653 427 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ARMCX4Q5H9R4 360 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 METAP1DQ6UB28 335 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 BRD3OSQ6XYD6 125 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 C17orf107Q6ZR85 190 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ZNF573Q86YE8 665 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 SIGLECL1Q8N7X8 197 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ZNF555Q8NEP9 628 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 OR13C9Q8NGT0 318 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 SPATA3Q8NHX4 192 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ST8SIA4Q92187 359 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 FGGYQ96C11 551 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 CYYR1Q96J86 154 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 DMRTB1Q96MA1 342 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 SPACA5Q96QH8 159 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 NKX3-1Q99801 234 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 MRI1Q9BV20 369 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 ANKRD60Q9BZ19 345 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 PLEKHA1Q9HB21 404 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 SEBOXQ9HB31 216 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 RBFOX1Q9NWB1 397 aaKnown RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 RASL12Q9NYN1 266 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 CNOT2Q9NZN8 540 aaKnown RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 CAB39Q9Y376 341 aaPredicted RBP7.12□□□□□ -1.27
SMG6-216ENST00000575176 KPTNQ9Y664 436 aa7.12□□□□□ -1.27
SMG6-216ENST00000575176 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 TRBV2A0A0J9YWF9 115 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 FAM230AA0A1W2PPH8 454 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 RFPL4AA6NLU0 287 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 SNTNA6NMZ2 147 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 RNF212BA8MTL3 300 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 RFPL4AL1F8VTS6 287 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 SLC1A7O00341 560 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 PSPNO60542 156 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 GATBO75879 557 aaKnown RBP7.11□□□□□ -1.27
SMG6-216ENST00000575176 KDM4BO94953 1096 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 ECDO95905 644 aaPredicted RBP7.11□□□□□ -1.27
SMG6-216ENST00000575176 KNG1P01042 644 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 BCL3P20749 454 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 FUT6P51993 359 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 UBA52P62987 128 aaKnown RBP7.11□□□□□ -1.27
SMG6-216ENST00000575176 SLC35A2P78381 396 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 ST3GAL4Q11206 333 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 KLRD1Q13241 179 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 ZNF273Q14593 569 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 SMIM21Q3B7S5 101 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 CCDC58Q4VC31 144 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 KLHL22Q53GT1 634 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 KIAA2026Q5HYC2 2103 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 RNLSQ5VYX0 342 aa7.11□□□□□ -1.27
SMG6-216ENST00000575176 BTNL3Q6UXE8 466 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms