RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 MTCH1Q9NZJ7 389 aa13.58□□□□□ -0.24
PFN1-203ENST00000574872 NLKQ9UBE8 527 aa13.58□□□□□ -0.24
PFN1-203ENST00000574872 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
PFN1-203ENST00000574872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■■■ 27.1
PFN1-203ENST00000574872 A0A1B0GW55 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 PHF1O43189 567 aaPredicted RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 CD5LO43866 347 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 RGS9O75916 674 aaPredicted RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 CYB5AP00167 134 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 TGFAP01135 160 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 WNT2P09544 360 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L2P0CJ85 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L3P0CJ86 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L4P0CJ87 422 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L5P0CJ88 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L6P0CJ89 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L7P0CJ90 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 CALCBP10092 127 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 MUC1P15941 1255 aaPredicted RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 BCL3P20749 454 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 GABRA5P31644 462 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 LCN2P80188 198 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 FABP5Q01469 135 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 SMIM21Q3B7S5 101 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 STUMQ69YW2 141 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4L9Q6RFH8 374 aaPredicted RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 UNQ9370/PRO34162Q6UXP9 181 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 ACP7Q6ZNF0 438 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 TMEM91Q6ZNR0 172 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 NLRC3Q7RTR2 1065 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 OR8B3Q8NGG8 313 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 OR51F2Q8NH61 342 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 THRSPQ92748 146 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 NEIL1Q96FI4 390 aaPredicted RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 CEP19Q96LK0 163 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 PPIL3Q9H2H8 161 aaKnown RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 ZNF696Q9H7X3 374 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 YAE1D1Q9NRH1 226 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 CTSZQ9UBR2 303 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 DUX4Q9UBX2 424 aa13.57□□□□□ -0.24
PFN1-203ENST00000574872 SF3B6Q9Y3B4 125 aaKnown RBP13.57□□□□□ -0.24
PFN1-203ENST00000574872 A0A087WXM4 84 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 IGKV1-12A0A0C4DH73 117 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 OR2AT4A6NND4 320 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 B4DSR2 109 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 GABRPO00591 440 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 TMPRSS2O15393 492 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 NOS1APO75052 506 aaPredicted RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 SC5DO75845 299 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 IGKV1D-12P01611 117 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 TMEM225BP0DP42 221 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 PSMA1P25786 263 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 GABRA2P47869 451 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 NPBWR2P48146 333 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 PITPNBP48739 271 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 GP2P55259 537 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 SNU13P55769 128 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 ZP1P60852 638 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 TRAM1Q15629 374 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 HSD17B12Q53GQ0 312 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 ESCO2Q56NI9 601 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 MKXQ8IYA7 352 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 FAM216BQ8N7L0 139 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 TNFAIP8L1Q8WVP5 186 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 EMG1Q92979 244 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 C12orf43Q96C57 262 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 C1orf159Q96HA4 380 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 SMURF1Q9HCE7 757 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 RBFOX1Q9NWB1 397 aaKnown RBP13.56□□□□□ -0.24
PFN1-203ENST00000574872 NDUFB11Q9NX14 153 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 FOXJ3Q9UPW0 622 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 MALRD1Q5VYJ5 2156 aa13.56□□□□□ -0.24
PFN1-203ENST00000574872 SONP18583 2426 aaKnown RBP13.55□□□□□ -0.24
PFN1-203ENST00000574872 IGKV1D-17A0A075B6S4 117 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 TRAPPC2LH3BP13 241 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 CCRL2O00421 344 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 TNFRSF13BO14836 293 aaPredicted RBP13.55□□□□□ -0.24
PFN1-203ENST00000574872 GPX5O75715 221 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 ALDOBP05062 364 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 MSMBP08118 114 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 PSG2P11465 335 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 SELLP14151 372 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 AMY2BP19961 511 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 ZNF93P35789 620 aaPredicted RBP13.55□□□□□ -0.24
PFN1-203ENST00000574872 OR3A4PP47883 348 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 CEBPDP49716 269 aaPredicted RBP13.55□□□□□ -0.24
PFN1-203ENST00000574872 ERVK11-1P61568 191 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 GNB2P62879 340 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 IKZF1Q13422 519 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 LURAP1LQ8IV03 231 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 JAGN1Q8N5M9 183 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 ANGPTL6Q8NI99 470 aa13.55□□□□□ -0.24
PFN1-203ENST00000574872 CPNE2Q96FN4 548 aaPredicted RBP13.55□□□□□ -0.24
PFN1-203ENST00000574872 SSBP3Q9BWW4 388 aaPredicted RBP13.55□□□□□ -0.24
PFN1-203ENST00000574872 ELL3Q9HB65 397 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms