RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 PIPP12273 146 aaPredicted RBP12.33□□□□□ -0.44
CTNS-209ENST00000574776 RAB13P51153 203 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 ACTR3P61158 418 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 BCL2L15Q5TBC7 163 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 FAHD1Q6P587 224 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 C11orf88Q6PI97 169 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 SLC35F2Q8IXU6 374 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 TCEANCQ8N8B7 351 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 DNAJC9Q8WXX5 260 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 CFHR4Q92496 578 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 NRBF2Q96F24 287 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.44
CTNS-209ENST00000574776 NPFFR1Q9GZQ6 430 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 RANBP3Q9H6Z4 567 aaPredicted RBP12.33□□□□□ -0.44
CTNS-209ENST00000574776 SLC22A13Q9Y226 551 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 POLDIP2Q9Y2S7 368 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 R4GMQ9 66 aa12.33□□□□□ -0.44
CTNS-209ENST00000574776 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 MEX3AA1L020 520 aaKnown RBP12.32□□□□□ -0.44
CTNS-209ENST00000574776 FAM90A8PA6NJQ4 464 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 ZNF670-ZNF695F2Z2N8 137 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 MITFO75030 526 aaPredicted RBP12.32□□□□□ -0.44
CTNS-209ENST00000574776 OPN1MWP04001 364 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 OPN1MW2P0DN77 364 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 OPN1MW3P0DN78 364 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 EFNB1P98172 346 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 PLA1AQ53H76 456 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 CALHM1Q8IU99 346 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 LYG1Q8N1E2 194 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 DYNAPQ8N1N2 210 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 ADGRL4Q9HBW9 690 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 HES4Q9HCC6 221 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 MRM2Q9UI43 246 aaKnown RBP12.32□□□□□ -0.44
CTNS-209ENST00000574776 POMPQ9Y244 141 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 SNX5Q9Y5X3 404 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
CTNS-209ENST00000574776 FAM230AA0A1W2PPH8 454 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 C17orf98A8MV24 154 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 H3BSH0 61 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 K7N7A8 449 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 INMTO95050 263 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 RPP14O95059 124 aaKnown RBP12.31□□□□□ -0.44
CTNS-209ENST00000574776 MPZP25189 248 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 EPHA2P29317 976 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 DLX6P56179 175 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 ERVK11-1P61568 191 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 COL10A1Q03692 680 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 HABP2Q14520 560 aaPredicted RBP12.31□□□□□ -0.44
CTNS-209ENST00000574776 ODF4Q2M2E3 257 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 BEAN1Q3B7T3 259 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 CCBE1Q6UXH8 406 aaPredicted RBP12.31□□□□□ -0.44
CTNS-209ENST00000574776 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 TRMT10AQ8TBZ6 339 aaKnown RBP12.31□□□□□ -0.44
CTNS-209ENST00000574776 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
CTNS-209ENST00000574776 IL4I1Q96RQ9 567 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 MNTQ99583 582 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 MOB1AQ9H8S9 216 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 CLN6Q9NWW5 311 aa12.31□□□□□ -0.44
CTNS-209ENST00000574776 F8VVB4 439 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 F8VWA3 439 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 PRB2P02812 416 aaPredicted RBP12.3□□□□□ -0.44
CTNS-209ENST00000574776 ARG1P05089 322 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 IL24Q13007 206 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 SSX2Q16385 188 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 DNAL1Q4LDG9 190 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 SLX4IPQ5VYV7 408 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 NXNL2Q5VZ03 156 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 Q6ZSR3 168 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 DTX3Q8N9I9 347 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 ASCC1Q8N9N2 400 aaKnown RBP12.3□□□□□ -0.44
CTNS-209ENST00000574776 TMEM163Q8TC26 289 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 TBX5Q99593 518 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 PRRG3Q9BZD7 231 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 PKIBQ9C010 78 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 ZNF702PQ9H963 129 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 KRT84Q9NSB2 600 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 MTCH1Q9NZJ7 389 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTNS-209ENST00000574776 SLC7A11Q9UPY5 501 aa12.3□□□□□ -0.44
CTNS-209ENST00000574776 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 CHRM2P08172 466 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 ZNF728P0DKX0 622 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 EDDM3BP56851 147 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 UBE2V2Q15819 145 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 NSUN5P1Q3KNT7 163 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 LDLRAD2Q5SZI1 272 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 SAMD5Q5TGI4 173 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 SSX6Q7RTT6 188 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 YIPF7Q8N8F6 280 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 OR13D1Q8NGV5 346 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 SLC7A6OSQ96CW6 309 aaPredicted RBP12.29□□□□□ -0.44
CTNS-209ENST00000574776 MALSU1Q96EH3 234 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 CADM1Q9BY67 442 aaKnown RBP12.29□□□□□ -0.44
CTNS-209ENST00000574776 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
CTNS-209ENST00000574776 IGKV1-27A0A075B6S5 117 aa12.28□□□□□ -0.44
CTNS-209ENST00000574776 A6NDX4 124 aa12.28□□□□□ -0.44
CTNS-209ENST00000574776 DHRS7CA6NNS2 312 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms