RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SLC17A5Q9NRA2 495 aa8.79□□□□□ -1
SMG6-213ENST00000573166 SIRT4Q9Y6E7 314 aaPredicted RBP8.79□□□□□ -1
SMG6-213ENST00000573166 TMEM131Q92545 1883 aa8.79□□□□□ -1
SMG6-213ENST00000573166 H7C417 338 aa8.79□□□□□ -1
SMG6-213ENST00000573166 ZG16O60844 167 aa8.79□□□□□ -1
SMG6-213ENST00000573166 RGS11O94810 467 aa8.79□□□□□ -1
SMG6-213ENST00000573166 ZNF205O95201 554 aa8.79□□□□□ -1
SMG6-213ENST00000573166 NGFP01138 241 aa8.79□□□□□ -1
SMG6-213ENST00000573166 GNB3P16520 340 aa8.79□□□□□ -1
SMG6-213ENST00000573166 FUT3P21217 361 aa8.79□□□□□ -1
SMG6-213ENST00000573166 OR3A4PP47883 348 aa8.79□□□□□ -1
SMG6-213ENST00000573166 C1orf174Q8IYL3 243 aa8.79□□□□□ -1
SMG6-213ENST00000573166 OR5H6Q8NGV6 325 aa8.79□□□□□ -1
SMG6-213ENST00000573166 SGK3Q96BR1 496 aa8.79□□□□□ -1
SMG6-213ENST00000573166 CNTD2Q9H8S5 307 aa8.79□□□□□ -1
SMG6-213ENST00000573166 NOX3Q9HBY0 568 aa8.79□□□□□ -1
SMG6-213ENST00000573166 BPTFQ12830 3046 aa8.79□□□□□ -1
SMG6-213ENST00000573166 MED19A0JLT2 244 aaPredicted RBP8.79□□□□□ -1
SMG6-213ENST00000573166 MEX3AA1L020 520 aaKnown RBP8.79□□□□□ -1
SMG6-213ENST00000573166 NDUFB3O43676 98 aa8.79□□□□□ -1
SMG6-213ENST00000573166 SS18L1O75177 396 aaPredicted RBP8.79□□□□□ -1
SMG6-213ENST00000573166 RP2O75695 350 aa8.79□□□□□ -1
SMG6-213ENST00000573166 IGHG3P01860 377 aa8.79□□□□□ -1
SMG6-213ENST00000573166 KIR3DL2P43630 455 aa8.79□□□□□ -1
SMG6-213ENST00000573166 IFITM2Q01629 132 aa8.79□□□□□ -1
SMG6-213ENST00000573166 ACSM1Q08AH1 577 aa8.79□□□□□ -1
SMG6-213ENST00000573166 ATXN7L3Q14CW9 347 aaPredicted RBP8.79□□□□□ -1
SMG6-213ENST00000573166 CDK10Q15131 360 aa8.79□□□□□ -1
SMG6-213ENST00000573166 IDO2Q6ZQW0 420 aa8.79□□□□□ -1
SMG6-213ENST00000573166 TMEM123Q8N131 208 aa8.79□□□□□ -1
SMG6-213ENST00000573166 OR10R2Q8NGX6 335 aa8.79□□□□□ -1
SMG6-213ENST00000573166 MAFIPQ8WZ33 124 aa8.79□□□□□ -1
SMG6-213ENST00000573166 C10orf35Q96D05 121 aa8.79□□□□□ -1
SMG6-213ENST00000573166 ADAT3Q96EY9 351 aaPredicted RBP8.79□□□□□ -1
SMG6-213ENST00000573166 C7orf50Q9BRJ6 194 aaKnown RBP8.79□□□□□ -1
SMG6-213ENST00000573166 MRPL13Q9BYD1 178 aaKnown RBP8.79□□□□□ -1
SMG6-213ENST00000573166 FER1L5A0AVI2 2057 aa8.79□□□□□ -1
SMG6-213ENST00000573166 A0A0U1RQV5 110 aa8.78□□□□□ -1
SMG6-213ENST00000573166 H7C2Y5 167 aa8.78□□□□□ -1
SMG6-213ENST00000573166 SCO1O75880 301 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ATG12O94817 140 aa8.78□□□□□ -1
SMG6-213ENST00000573166 PMP2P02689 132 aa8.78□□□□□ -1
SMG6-213ENST00000573166 GLAP06280 429 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ERVK-16P61578 105 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ENDOGQ14249 297 aaKnown RBP8.78□□□□□ -1
SMG6-213ENST00000573166 ZMYND11Q15326 602 aa8.78□□□□□ -1
SMG6-213ENST00000573166 LRRC10Q5BKY1 277 aa8.78□□□□□ -1
SMG6-213ENST00000573166 OR52I2Q8NH67 350 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ST8SIA4Q92187 359 aa8.78□□□□□ -1
SMG6-213ENST00000573166 PRDM14Q9GZV8 571 aa8.78□□□□□ -1
SMG6-213ENST00000573166 SLA2Q9H6Q3 261 aa8.78□□□□□ -1
SMG6-213ENST00000573166 TRAV8-7A0A075B6U6 113 aa8.78□□□□□ -1
SMG6-213ENST00000573166 EIF4EP06730 217 aaKnown RBP8.78□□□□□ -1
SMG6-213ENST00000573166 B3GALT5-AS1P59052 145 aa8.78□□□□□ -1
SMG6-213ENST00000573166 LINC00299Q6ZSB3 139 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ZNF695Q8IW36 515 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ZFAND1Q8TCF1 268 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ZNRF4Q8WWF5 429 aa8.78□□□□□ -1
SMG6-213ENST00000573166 KIRREL1Q96J84 757 aa8.78□□□□□ -1
SMG6-213ENST00000573166 DPCDQ9BVM2 203 aaPredicted RBP8.78□□□□□ -1
SMG6-213ENST00000573166 ST6GALNAC2Q9UJ37 374 aa8.78□□□□□ -1
SMG6-213ENST00000573166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.78□□□□□ -13e-6■■■□□ 17.1
SMG6-213ENST00000573166 C5orf42Q9H799 3197 aa8.78□□□□□ -1
SMG6-213ENST00000573166 NKX2-6A6NCS4 301 aa8.78□□□□□ -1
SMG6-213ENST00000573166 GLI4P10075 376 aa8.78□□□□□ -1
SMG6-213ENST00000573166 COX5BP10606 129 aa8.78□□□□□ -1
SMG6-213ENST00000573166 TIMP3P35625 211 aa8.78□□□□□ -1
SMG6-213ENST00000573166 EVX1P49640 407 aa8.78□□□□□ -1
SMG6-213ENST00000573166 GK2Q14410 553 aaPredicted RBP8.78□□□□□ -1
SMG6-213ENST00000573166 GRK1Q15835 563 aa8.78□□□□□ -1
SMG6-213ENST00000573166 PHYHD1Q5SRE7 291 aa8.78□□□□□ -1
SMG6-213ENST00000573166 HACD4Q5VWC8 232 aa8.78□□□□□ -1
SMG6-213ENST00000573166 RPUSD3Q6P087 351 aaKnown RBP8.78□□□□□ -1
SMG6-213ENST00000573166 RHOUQ7L0Q8 258 aa8.78□□□□□ -1
SMG6-213ENST00000573166 OR5A2Q8NGI9 324 aa8.78□□□□□ -1
SMG6-213ENST00000573166 CHST5Q9GZS9 411 aa8.78□□□□□ -1
SMG6-213ENST00000573166 MYOZ1Q9NP98 299 aaPredicted RBP8.78□□□□□ -1
SMG6-213ENST00000573166 TREM1Q9NP99 234 aa8.78□□□□□ -1
SMG6-213ENST00000573166 PIGBOS1A0A0B4J2F0 54 aa8.78□□□□□ -1
SMG6-213ENST00000573166 HMX3A6NHT5 357 aa8.78□□□□□ -1
SMG6-213ENST00000573166 GABARAPH6UMI1 98 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ADAM20O43506 726 aa8.78□□□□□ -1
SMG6-213ENST00000573166 CSF3P09919 207 aa8.78□□□□□ -1
SMG6-213ENST00000573166 OR4A8P0C604 315 aa8.78□□□□□ -1
SMG6-213ENST00000573166 CCDC190Q86UF4 302 aa8.78□□□□□ -1
SMG6-213ENST00000573166 ZIC4Q8N9L1 334 aa8.78□□□□□ -1
SMG6-213ENST00000573166 OR10J5Q8NHC4 309 aa8.78□□□□□ -1
SMG6-213ENST00000573166 BCL2L2Q92843 193 aaPredicted RBP8.78□□□□□ -1
SMG6-213ENST00000573166 ARL6Q9H0F7 186 aa8.78□□□□□ -1
SMG6-213ENST00000573166 METTL17Q9H7H0 456 aaPredicted RBP8.78□□□□□ -1
SMG6-213ENST00000573166 PROK2Q9HC23 129 aa8.78□□□□□ -1
SMG6-213ENST00000573166 MGAT4CQ9UBM8 478 aa8.78□□□□□ -1
SMG6-213ENST00000573166 PURGQ9UJV8 347 aaKnown RBP8.78□□□□□ -1
SMG6-213ENST00000573166 WNK2Q9Y3S1 2297 aa8.77□□□□□ -1
SMG6-213ENST00000573166 CECR9P0C854 216 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 GNLYP22749 145 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 CD34P28906 385 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 IL13RA1P78552 427 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 NAAAQ02083 359 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms