RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 PELI1Q96FA3 418 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 C4orf36Q96KX1 117 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 DMRTB1Q96MA1 342 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 ZNF649Q9BS31 505 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 C9orf16Q9BUW7 83 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 ADI1Q9BV57 179 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 ZNF747Q9BV97 191 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 PKIBQ9C010 78 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 CHST5Q9GZS9 411 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 UNKLQ9H9P5 680 aaKnown RBP4.43□□□□□ -1.7
CHD3-212ENST00000570758 PLEKHA1Q9HB21 404 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 HES4Q9HCC6 221 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 C1RLQ9NZP8 487 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 FRRS1LQ9P0K9 344 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD3-212ENST00000570758 POLDIP2Q9Y2S7 368 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 FBN3Q75N90 2809 aa4.43□□□□□ -1.7
CHD3-212ENST00000570758 TRBV23-1A0A0A0MS06 115 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 LOC100130705A0A1B0GUX0 176 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 TMEM82A0PJX8 343 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 OR4C45A6NMZ5 311 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 E9PI62 339 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 J3QLW9 94 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 GPR137BO60478 399 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 GATBO75879 557 aaKnown RBP4.42□□□□□ -1.7
CHD3-212ENST00000570758 IGHA1P01876 353 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 HTR1AP08908 422 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 UBCP0CG48 685 aaKnown RBP4.42□□□□□ -1.7
CHD3-212ENST00000570758 CALCBP10092 127 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 CCL3L1P16619 93 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ZNF19P17023 458 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 PAX6P26367 422 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 SAA4P35542 130 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 IER3P46695 156 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 FUT6P51993 359 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ACTC1P68032 377 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ACTA1P68133 377 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 COL10A1Q03692 680 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
CHD3-212ENST00000570758 ZNF273Q14593 569 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 TAF9Q16594 264 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 MEDAGQ5VYS4 303 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 TMEM200BQ69YZ2 307 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ZBTB49Q6ZSB9 765 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 C1orf122Q6ZSJ8 110 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 SLC25A26Q70HW3 274 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 LHFPL3Q86UP9 236 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 CMTM4Q8IZR5 234 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ZNF561Q8N587 486 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 C11orf42Q8N5U0 333 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 TMEM86BQ8N661 226 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 CCDC54Q8NEL0 328 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 OR51A4Q8NGJ6 313 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 OR52I1Q8NGK6 324 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 C17orf50Q8WW18 174 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 APH1BQ8WW43 257 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 SSMEM1Q8WWF3 244 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 FGGYQ96C11 551 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 C10orf35Q96D05 121 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 AJUBAQ96IF1 538 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 CEP19Q96LK0 163 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ALG8Q9BVK2 526 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
CHD3-212ENST00000570758 AMBNQ9NP70 447 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 FAM118AQ9NWS6 357 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 MTCH1Q9NZJ7 389 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 IL36RNQ9UBH0 155 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 OR14J1Q9UGF5 321 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 SLC7A11Q9UPY5 501 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 MYRFQ9Y2G1 1151 aa4.42□□□□□ -1.7
CHD3-212ENST00000570758 IGKV1-12A0A0C4DH73 117 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 MEX3AA1L020 520 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 MEIOCA2RUB1 952 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 H0YAE9 185 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 K7N7A8 449 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SLC1A7O00341 560 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 ANGPTL7O43827 346 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 ZNF737O75373 536 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 WBP4O75554 376 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 NDUFA7O95182 113 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SERPINA3P01011 423 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 IGKV1D-12P01611 117 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 TK1P04183 234 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 ISG15P05161 165 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 CRYBA1P05813 215 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 FBP1P09467 338 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 PIPP12273 146 aaPredicted RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 ZNF20P17024 532 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 BCL3P20749 454 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 COX7A1P24310 79 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 EEF1B2P24534 225 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 AZGP1P25311 298 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 DUSP1P28562 367 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 NPBWR2P48146 333 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 POU3F4P49335 361 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 CCR9P51686 369 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 BMXP51813 675 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 UBE2E1P51965 193 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 RAG2P55895 527 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 DLX6P56179 175 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms