RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 FAM25AB3EWG3 89 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM25CB3EWG5 89 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM25GB3EWG6 89 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 CLDN25C9JDP6 229 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 ANGPTL7O43827 346 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 CDC14BO60729 498 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 SCGNO76038 276 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 HTR3BO95264 441 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 MPIG6BO95866 241 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLC2A2P11168 524 aaPredicted RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 GTF2F2P13984 249 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 PRKACAP17612 351 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 GLRA1P23415 457 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 CPT2P23786 658 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 MPZP25189 248 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 CFPP27918 469 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 SNU13P55769 128 aaKnown RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZP1P60852 638 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 ID3Q02535 119 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 MAB21L1Q13394 359 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 DYNC1I2Q13409 638 aaKnown RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 MST1LQ2TV78 715 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 CNPY1Q3B7I2 92 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 UBE2NLQ5JXB2 153 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 C1orf100Q5SVJ3 147 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 C11orf71Q6IPW1 123 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR2W3Q7Z3T1 314 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 PEG10Q86TG7 708 aaKnown RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 WDR86Q86TI4 376 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 CALHM1Q8IU99 346 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZCCHC24Q8N2G6 241 aaKnown RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 SAMD12Q8N8I0 201 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 POC1AQ8NBT0 407 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 PXT1Q8NFP0 134 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR51D1Q8NGF3 324 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR4D6Q8NGJ1 314 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR10K1Q8NGX5 313 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR10Z1Q8NGY1 313 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 KCNG3Q8TAE7 436 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM46BQ96A09 425 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 TIMD4Q96H15 378 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 FANCD2OSQ96PS1 177 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 GFI1Q99684 422 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 FGF23Q9GZV9 251 aaPredicted RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 TLNRD1Q9H1K6 362 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR51I2Q9H344 312 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 PLEKHF2Q9H8W4 249 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 RHOFQ9HBH0 211 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 MYOZ1Q9NP98 299 aaPredicted RBP5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 RNF7Q9UBF6 113 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 COMMD3Q9UBI1 195 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 GLS2Q9UI32 602 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 RELNP78509 3460 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 ANKHD1Q8IWZ3 2542 aaKnown RBP5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 NBASA2RRP1 2371 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 MYO18BQ8IUG5 2567 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A0B4J203 849 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 ISPDA4D126 451 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 H3BUI4 141 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 AKR7A2O43488 359 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 SYNGR1O43759 233 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 PTBP3O95758 552 aaKnown RBP5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 CYB5R3P00387 301 aaPredicted RBP5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 CSF3P09919 207 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 PGA5P0DJD9 388 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 DAOP14920 347 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 MGMTP16455 207 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 BCL3P20749 454 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 DNASE1P24855 282 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 EFNA4P52798 201 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 ATP5J2P56134 94 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 MRPS15P82914 257 aaKnown RBP5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 IKZF1Q13422 519 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 MPPED2Q15777 294 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 KCNJ8Q15842 424 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 MICBQ29980 383 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 SPIN3Q5JUX0 258 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 WDR82Q6UXN9 313 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF826PQ6ZT77 177 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 LINC00596Q86U02 117 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 NR2C2APQ86WQ0 139 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 BATF2Q8N1L9 274 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 OSR2Q8N2R0 312 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 Q8TCH9 128 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 NEK7Q8TDX7 302 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 CCL17Q92583 94 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 RDH5Q92781 318 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 GAL3ST1Q99999 423 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 BARHL1Q9BZE3 327 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 SELENOIQ9C0D9 397 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 MMP27Q9H306 513 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 KCNK15Q9H427 330 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 GCM1Q9NP62 436 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 DLL4Q9NR61 685 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM106BQ9NUM4 274 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 RBFOX1Q9NWB1 397 aaKnown RBP5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 RHBDL2Q9NX52 303 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 IL36GQ9NZH8 169 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 SPATA2Q9UM82 520 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms