RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 TCF23Q7RTU1 214 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ANGPTL5Q86XS5 388 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ENTHD1Q8IYW4 607 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 CMTM4Q8IZR5 234 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 RDH10Q8IZV5 341 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 BATF2Q8N1L9 274 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ZNF561Q8N587 486 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 TMEM185AQ8NFB2 350 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 OR2G2Q8NGZ5 317 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 OR10AC1Q8NH08 325 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 TRMT10AQ8TBZ6 339 aaKnown RBP6.39□□□□□ -1.39
CDH3-209ENST00000569080 NPRL2Q8WTW4 380 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 C17orf50Q8WW18 174 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 C10orf35Q96D05 121 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 LGALS12Q96DT0 336 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 RNFT2Q96EX2 444 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ADAT3Q96EY9 351 aaPredicted RBP6.39□□□□□ -1.39
CDH3-209ENST00000569080 SLC29A1Q99808 456 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 SLITRK2Q9H156 845 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 ZNF696Q9H7X3 374 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 METTL8Q9H825 291 aaKnown RBP6.39□□□□□ -1.39
CDH3-209ENST00000569080 TNFRSF19Q9NS68 423 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 IMPAD1Q9NX62 359 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 MTCH1Q9NZJ7 389 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 GNG8Q9UK08 70 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDH3-209ENST00000569080 POLDIP2Q9Y2S7 368 aa6.39□□□□□ -1.39
CDH3-209ENST00000569080 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
CDH3-209ENST00000569080 A0A1W2PQ09 198 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 OR4C45A6NMZ5 311 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 SPRY1O43609 319 aaPredicted RBP6.38□□□□□ -1.39
CDH3-209ENST00000569080 GATBO75879 557 aaKnown RBP6.38□□□□□ -1.39
CDH3-209ENST00000569080 NXPH2O95156 264 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 KNG1P01042 644 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 IGHA1P01876 353 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 TK1P04183 234 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 ISG15P05161 165 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 FBP1P09467 338 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 DBTP11182 482 aaKnown RBP6.38□□□□□ -1.39
CDH3-209ENST00000569080 CCL3L1P16619 93 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 PRDX2P32119 198 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 UBE2E1P51965 193 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 DLX6P56179 175 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 OR12D2P58182 307 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 KRTAP10-3P60369 221 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 SRSF4Q08170 494 aaKnown RBP6.38□□□□□ -1.39
CDH3-209ENST00000569080 ACSM1Q08AH1 577 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 ZNF273Q14593 569 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 MEDAGQ5VYS4 303 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 FAM220AQ7Z4H9 259 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 PQLC1Q8N2U9 271 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 CCDC54Q8NEL0 328 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 OR51A4Q8NGJ6 313 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 APH1BQ8WW43 257 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 PP6455Q8WZ26 134 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 DYRK2Q92630 601 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 PELI1Q96FA3 418 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 FAM234AQ9H0X4 552 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 PLEKHA1Q9HB21 404 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 S100A14Q9HCY8 104 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 FRRS1LQ9P0K9 344 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 IL36RNQ9UBH0 155 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 VPREB3Q9UKI3 123 aa6.38□□□□□ -1.39
CDH3-209ENST00000569080 EXOGQ9Y2C4 368 aaKnown RBP6.38□□□□□ -1.39
CDH3-209ENST00000569080 FAM230AA0A1W2PPH8 454 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 A0A1W2PRD5 423 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 A0A1W2PRF3 423 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 A0A1W2PRM7 423 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 TMEM82A0PJX8 343 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 MEIOCA2RUB1 952 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 K7N7A8 449 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 SLC1A7O00341 560 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 ATP6V1E1P36543 226 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 CCR9P51686 369 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 FUT6P51993 359 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 PROK1P58294 105 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 ERVFRD-1P60508 538 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 RPL31P62899 125 aaKnown RBP6.37□□□□□ -1.39
CDH3-209ENST00000569080 OLFML2AQ68BL7 652 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 TMEM200BQ69YZ2 307 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 C17orf107Q6ZR85 190 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 SLC25A26Q70HW3 274 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 UTS2BQ765I0 119 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 RNF144BQ7Z419 303 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 KCTD20Q7Z5Y7 419 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 MKXQ8IYA7 352 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 FAM185AQ8N0U4 392 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 ACBD7Q8N6N7 88 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 ZSCAN4Q8NAM6 433 aaPredicted RBP6.37□□□□□ -1.39
CDH3-209ENST00000569080 BEND2Q8NDZ0 799 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 DNAAF1Q8NEP3 725 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 OR5D13Q8NGL4 314 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 OR4F5Q8NH21 305 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 RHOXF1Q8NHV9 184 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 LINC01006Q8NI28 216 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 TBC1D15Q8TC07 691 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 SLAMF9Q96A28 289 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 C4orf36Q96KX1 117 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 CEP19Q96LK0 163 aa6.37□□□□□ -1.39
CDH3-209ENST00000569080 CITED1Q99966 193 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms