RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SVILO95425 2214 aa4.6□□□□□ -1.67
CAPN3-217ENST00000567817 MED13LQ71F56 2210 aa4.6□□□□□ -1.67
CAPN3-217ENST00000567817 DNHD1Q96M86 4753 aa4.6□□□□□ -1.67
CAPN3-217ENST00000567817 A0A0B4J2A0 478 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 RPS10-NUDT3A0A1W2PQS6 291 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 A6NL46 340 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 GJE1A6NN92 205 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 ZNF726A6NNF4 738 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 G3V3Q6 166 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 MS4A18H0YCH9 400 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 PRYO14603 147 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 BET1O15155 118 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 DHHO43323 396 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 EIF1BO60739 113 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CA11O75493 328 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SNRNP200O75643 2136 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SCRG1O75711 98 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 PNPP00491 289 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CD8AP01732 235 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 IGHEP01854 428 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 PRF1P14222 555 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 LIFP15018 202 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 MGMTP16455 207 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CCL1P22362 96 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 LSM6P62312 80 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 RPS27AP62979 156 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 UBA52P62987 128 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SLC35A1P78382 337 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CYCSP99999 105 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 PMPCAQ10713 525 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 FOXF1Q12946 379 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 TRA2AQ13595 282 aaKnown RBP eCLIP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 EXT1Q16394 746 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 KIF26BQ2KJY2 2108 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 MS4A18Q3C1V0 323 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 VAX1Q5SQQ9 334 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 NSUN5P2Q63ZY6 315 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 GSG1LQ6UXU4 331 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 UTS2BQ765I0 119 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CPEB2Q7Z5Q1 589 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 COMMD7Q86VX2 200 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 LYPD6Q86Y78 171 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 ARRDC1Q8N5I2 433 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 C12orf45Q8N5I9 185 aaPredicted RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 JAGN1Q8N5M9 183 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 EIF4E3Q8N5X7 224 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 NRACQ8N912 160 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 C9orf106Q8NAJ2 232 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 NOXO1Q8NFA2 376 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 OR1M1Q8NGA1 313 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 OR51A4Q8NGJ6 313 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 OR51S1Q8NGJ8 323 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 OR5M8Q8NGP6 311 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 KCNG3Q8TAE7 436 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 INTS12Q96CB8 462 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SLAMF6Q96DU3 332 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SPACA9Q96E40 222 aaPredicted RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SFXN2Q96NB2 322 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 OXGR1Q96P68 337 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 AMELYQ99218 206 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 PHB2Q99623 299 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 ZPBPQ9BS86 351 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 URM1Q9BTM9 101 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CRB3Q9BUF7 120 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 MRPL13Q9BYD1 178 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 RTN4RQ9BZR6 473 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CST11Q9H112 138 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 METTL7AQ9H8H3 244 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 FAM206AQ9NX38 181 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 TAS2R4Q9NYW5 299 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 MRPL15Q9P015 296 aaKnown RBP4.59□□□□□ -1.67
CAPN3-217ENST00000567817 CTSFQ9UBX1 484 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SHPKQ9UHJ6 478 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 FLVCR2Q9UPI3 526 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 SLC22A13Q9Y226 551 aa4.59□□□□□ -1.67
CAPN3-217ENST00000567817 RP1P56715 2156 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 LOC102723996A0A087X1L8 192 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 TRBV11-1A0A0K0K1C0 115 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 A0A1B0GTI1 187 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 KANTRA0A1W2PQU2 76 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 hCG_1807616A0A1W2PRN6 198 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 DHRS7CA6NNS2 312 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CEACAM18A8MTB9 384 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 I3L521 148 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 GOSR2O14653 212 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ARPC5O15511 151 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MTRF1O75570 445 aaKnown RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 TOXO94900 526 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CD3DP04234 171 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 IFNA6P05013 189 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 FCER2P06734 321 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 OR4E1P0C645 316 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ACSM4P0C7M7 580 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 RNF224P0DH78 156 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 PGA4P0DJD7 388 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 PGA3P0DJD8 388 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 FGF5P12034 268 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 SLC25A4P12235 298 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF17P17021 662 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms