RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 NKAIN3Q8N8D7 197 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 MAPK1IP1LQ8NDC0 245 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 OR13F1Q8NGS4 319 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 TMIGD2Q96BF3 282 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 TIMD4Q96H15 378 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 C1orf147Q96MC9 270 aaPredicted RBP6.83□□□□□ -1.32
CDH13-208ENST00000566333 REG4Q9BYZ8 158 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 NARFLQ9H6Q4 476 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 VCX3AQ9NNX9 186 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 TXNL4BQ9NX01 149 aaKnown RBP6.83□□□□□ -1.32
CDH13-208ENST00000566333 IL36RNQ9UBH0 155 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 CTSZQ9UBR2 303 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 CKLFQ9UBR5 152 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 ZNF222Q9UK12 451 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 STUB1Q9UNE7 303 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 KIAA2026Q5HYC2 2103 aa6.83□□□□□ -1.32
CDH13-208ENST00000566333 HIVEP2P31629 2446 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 IGKV1D-17A0A075B6S4 117 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 PPIAL4EA0A075B759 164 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 IGHV3OR15-7A0A075B7D8 119 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 A0A1B0GW55 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 ISPDA4D126 451 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 OOEPA6NGQ2 149 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 CEACAM18A8MTB9 384 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 PPIAL4DF5H284 164 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 ARL6IP5O75915 188 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 KDM4BO94953 1096 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 IGHV2-5P01817 119 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 TFF1P04155 84 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 MAS1P04201 325 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 SFTPBP07988 381 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 ACAA1P09110 424 aaPredicted RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L2P0CJ85 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L3P0CJ86 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L4P0CJ87 422 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L5P0CJ88 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L6P0CJ89 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L7P0CJ90 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 PPIAL4FP0DN26 164 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 CD37P11049 281 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 IRF2P14316 349 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 SRMP19623 302 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 BCL3P20749 454 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 USF1P22415 310 aaPredicted RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 NPBWR2P48146 333 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 GMFBP60983 142 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 SEC61A1P61619 476 aaKnown RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 SFRP4Q6FHJ7 346 aaPredicted RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 C22orf42Q6IC83 251 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4L9Q6RFH8 374 aaPredicted RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 ACP7Q6ZNF0 438 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 SLC16A12Q6ZSM3 486 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 LRRC28Q86X40 367 aaPredicted RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 SAXO1Q8IYX7 474 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 BOLLQ8N9W6 283 aaKnown RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 OR4D6Q8NGJ1 314 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 ANGPTL6Q8NI99 470 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 RAB1CQ92928 201 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 ZDHHC16Q969W1 377 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 C1orf159Q96HA4 380 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 CEP19Q96LK0 163 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 GAL3ST1Q99999 423 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 TMEM246Q9BRR3 403 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 CENPOQ9BU64 300 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 TMUB1Q9BVT8 246 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 RNF167Q9H6Y7 350 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 TMEM165Q9HC07 324 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 RBFOX1Q9NWB1 397 aaKnown RBP6.82□□□□□ -1.32
CDH13-208ENST00000566333 DUX4Q9UBX2 424 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 POLDIP2Q9Y2S7 368 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 PPIAL4AQ9Y536 164 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 NF1P21359 2839 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 NIPBLQ6KC79 2804 aaeCLIP6.82□□□□□ -1.32
CDH13-208ENST00000566333 NAV3Q8IVL0 2385 aa6.82□□□□□ -1.32
CDH13-208ENST00000566333 SETD2Q9BYW2 2564 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 TRAV1-2A0A0B4J238 106 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 A0A0G2JK05 382 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 FAM157AC9JC47 383 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 GYPAP02724 150 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 OCMP0CE72 109 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 IGHV4-31P0DP07 118 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 SELLP14151 372 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 MUC1P15941 1255 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 GLRA1P23415 457 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 CFPP27918 469 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 ZNF93P35789 620 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 TGFBR1P36897 503 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 PTGFRP43088 359 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 CEBPDP49716 269 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 OR10A3P58181 314 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 TMEM249Q2WGJ8 235 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 SMIM21Q3B7S5 101 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 FAM166AQ6J272 317 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 LYPD2Q6UXB3 125 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 ASCL4Q6XD76 172 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 DCDC5Q6ZRR9 648 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 PEG10Q86TG7 708 aaKnown RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 MUC20Q8N307 709 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 SPICQ8N5J4 248 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 JAGN1Q8N5M9 183 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms