RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ECI1	P42126	302 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	CAV2	P51636	162 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	MTCP1	P56278	107 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	SLC23A3	Q6PIS1	610 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR2AE1	Q8NHA4	323 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	SRXN1	Q9BYN0	137 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	ULBP2	Q9BZM5	246 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF700	Q9H0M5	742 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	RHOF	Q9HBH0	211 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	TREM1	Q9NP99	234 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	NXT1	Q9UKK6	140 aa	Known RBP	11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	MEMO1	Q9Y316	297 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	FAM96B	Q9Y3D0	163 aa		11.46	□□□□□ -0.58
SCAPER-215	ENST00000565507	ANGPTL7	O43827	346 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	TMEM225B	P0DP42	221 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	MPL	P40238	635 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	NPBWR1	P48145	328 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	HAGHL	Q6PII5	290 aa	Predicted RBP	11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	FOXRED2	Q8IWF2	684 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	NAT6	Q93015	286 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	SPTSSA	Q969W0	71 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	INTS12	Q96CB8	462 aa	Known RBP	11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	NRIP2	Q9BQI9	281 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	NAA11	Q9BSU3	229 aa	Predicted RBP	11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	FAAP24	Q9BTP7	215 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	RCC2	Q9P258	522 aa	Known RBP	11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	HS3ST3B1	Q9Y662	390 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	TNFSF11	O14788	317 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	SYNGR3	O43761	229 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	DEDD	O75618	318 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	RRAD	P55042	308 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	RAC1	P63000	192 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	TAF9	Q16594	264 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	SGPP2	Q8IWX5	399 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	SPSB1	Q96BD6	273 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	HSF4	Q9ULV5	492 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	EDAR	Q9UNE0	448 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	LHX6	Q9UPM6	363 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	SPTBN2	O15020	2390 aa		11.45	□□□□□ -0.58
SCAPER-215	ENST00000565507	SPRY1	O43609	319 aa	Predicted RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	CST4	P01036	141 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	FCGR3A	P08637	254 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR5H8	P0DN80	308 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	RPL12	P30050	165 aa	Known RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	SULT1A2	P50226	295 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	IL11RA	Q14626	422 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	GGNBP1	Q5YKI7	109 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	DHRS11	Q6UWP2	260 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	BTNL8	Q6UX41	500 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	PLXDC2	Q6UX71	529 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	MRPL24	Q96A35	216 aa	Known RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	JSRP1	Q96MG2	331 aa	Predicted RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	AK3	Q9UIJ7	227 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	PADI1	Q9ULC6	663 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	AMDHD2	Q9Y303	409 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507		H7C2Y5	167 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	NTN3	O00634	580 aa	Predicted RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	SNAPIN	O95295	136 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	CER1	O95813	267 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	SSR4	P51571	173 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	RPS18	P62269	152 aa	Known RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	EIF5A	P63241	154 aa	Known RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	EXT1	Q16394	746 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	IQCF2	Q8IXL9	164 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	FNDC9	Q8TBE3	224 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	M1AP	Q8TC57	530 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	METTL9	Q9H1A3	318 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	DKKL1	Q9UK85	242 aa		11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507	PTRH2	Q9Y3E5	179 aa	Known RBP	11.44	□□□□□ -0.58
SCAPER-215	ENST00000565507		K7EPK0	472 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	TERT	O14746	1132 aa	Known RBP	11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	SGCE	O43556	437 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	MED6	O75586	246 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	GAPDH	P04406	335 aa	Known RBP	11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	CD5	P06127	495 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	NME2	P22392	152 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	PRSS12	P56730	875 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	RAB35	Q15286	201 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	EIF5AL1	Q6IS14	154 aa	Known RBP	11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	ASCL4	Q6XD76	172 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	LINC00518	Q8N0U6	118 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	SPAG16	Q8N0X2	631 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	GPR137C	Q8N3F9	429 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	FAM71E2	Q8N5Q1	922 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	REEP6	Q96HR9	211 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	PRRX2	Q99811	253 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	FBXL17	Q9UF56	701 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	CUL9	Q8IWT3	2517 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF205	O95201	554 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	CHAT	P28329	748 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	FCGR2C	P31995	323 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	OPRM1	P35372	400 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	TMEM33	P57088	247 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	B3GALT5-AS1	P59052	145 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	TMEM42	Q69YG0	159 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF774	Q6NX45	483 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	SULT4A1	Q9BR01	284 aa		11.43	□□□□□ -0.58
SCAPER-215	ENST00000565507	SF3B5	Q9BWJ5	86 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms