RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ZNF222Q9UK12 451 aa5.24□□□□□ -1.57
TCF4-228ENST00000565393 VPREB3Q9UKI3 123 aa5.24□□□□□ -1.57
TCF4-228ENST00000565393 V9GYS6 101 aa5.24□□□□□ -1.57
TCF4-228ENST00000565393 MXRA5Q9NR99 2828 aa5.24□□□□□ -1.57
TCF4-228ENST00000565393 MEX3AA1L020 520 aaKnown RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 J3QT63 122 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 NOS1APO75052 506 aaPredicted RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 SRSF10O75494 262 aaKnown RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 CIB2O75838 187 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 TSPAN9O75954 239 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 CLPXO76031 633 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 APOL3O95236 402 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 CYB5AP00167 134 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 IGLV3-1P01715 115 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 OCM2P0CE71 109 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 OCMP0CE72 109 aaPredicted RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 PGA5P0DJD9 388 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 FCGR1AP12314 374 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 CCL3L1P16619 93 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 PAX6P26367 422 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 HTR1FP30939 366 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 GABRA5P31644 462 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 RAB13P51153 203 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 FUT6P51993 359 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 PROK1P58294 105 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 COL10A1Q03692 680 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 IL24Q13007 206 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 DYNC1I2Q13409 638 aaKnown RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 UBE2V2Q15819 145 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 PDLIM3Q53GG5 364 aaPredicted RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 HCP5Q6MZN7 132 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 Q6ZTK2 550 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 GDPD3Q7L5L3 318 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 CALHM1Q8IU99 346 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 RDH10Q8IZV5 341 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 C11orf44Q8N8P7 122 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 ASCC1Q8N9N2 400 aaKnown RBP5.23□□□□□ -1.57
TCF4-228ENST00000565393 C17orf50Q8WW18 174 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 RFKQ969G6 155 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 SLAMF9Q96A28 289 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 BORCS8Q96FH0 119 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 CEP19Q96LK0 163 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 CIB1Q99828 191 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 NRIP2Q9BQI9 281 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 MMP27Q9H306 513 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 MOB1AQ9H8S9 216 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 USE1Q9NZ43 259 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 GNG8Q9UK08 70 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 SIGLEC9Q9Y336 463 aa5.23□□□□□ -1.57
TCF4-228ENST00000565393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.23□□□□□ -1.57
TCF4-228ENST00000565393 DAPL1A0PJW8 107 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 SAC3D1A6NKF1 404 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 H3BUI4 141 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 SULT1C4O75897 302 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ARG1P05089 322 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 CSF1P09603 554 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 VSIG10L2P0DP72 767 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 CALCBP10092 127 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 GABRR1P24046 479 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 BMXP51813 675 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ATP1B3P54709 279 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 MTCP1P56278 107 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 CDC42P60953 191 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 FAM189A2Q15884 450 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 SSX2Q16385 188 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 LRRC75BQ2VPJ9 315 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ZIK1Q3SY52 487 aaPredicted RBP5.22□□□□□ -1.57
TCF4-228ENST00000565393 TP53I3Q53FA7 332 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 PLA1AQ53H76 456 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 TMEM42Q69YG0 159 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ZNF782Q6ZMW2 699 aaPredicted RBP5.22□□□□□ -1.57
TCF4-228ENST00000565393 SLC25A26Q70HW3 274 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 SSX6Q7RTT6 188 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 FAM220AQ7Z4H9 259 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 KCTD20Q7Z5Y7 419 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 CATSPERDQ86XM0 798 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 C11orf42Q8N5U0 333 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 DTX3Q8N9I9 347 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 OR4C13Q8NGP0 309 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 OR8J1Q8NGP2 316 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 OR13D1Q8NGV5 346 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 OR2T6Q8NHC8 308 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 PPP1R35Q8TAP8 253 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 EME1Q96AY2 570 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 FGGYQ96C11 551 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 CENPNQ96H22 339 aaPredicted RBP5.22□□□□□ -1.57
TCF4-228ENST00000565393 PKIBQ9C010 78 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 RAB18Q9NP72 206 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ABCB10Q9NRK6 738 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 IMPAD1Q9NX62 359 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 FAM53CQ9NYF3 392 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 MTCH1Q9NZJ7 389 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 FBLN5Q9UBX5 448 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 GLS2Q9UI32 602 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 OAZ3Q9UMX2 235 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ORC6Q9Y5N6 252 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 ARHGAP32A7KAX9 2087 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 TANC2Q9HCD6 1990 aa5.22□□□□□ -1.57
TCF4-228ENST00000565393 STAB1Q9NY15 2570 aa5.21□□□□□ -1.57
TCF4-228ENST00000565393 hADV38S2A0JD32 116 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms