RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FBXW12Q6X9E4 464 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 LIPGQ9Y5X9 500 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 BORCS7-ASMTA0A0B4J1R7 106 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 WRBO00258 174 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 CYB5BO43169 146 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 EFNA2O43921 213 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 DBHP09172 617 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 UBE2V2Q15819 145 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 CHST11Q9NPF2 352 aa17.96■□□□□ 0.47
MAP1LC3B-206ENST00000564844 SCGNO76038 276 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HOXC4P09017 264 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 GABRG2P18507 467 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 APOBEC1P41238 236 aaKnown RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 UBAC2Q8NBM4 344 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 OR14K1Q8NGZ2 314 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TAAR9Q96RI9 348 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TWSG1Q9GZX9 223 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 GAR1Q9NY12 217 aaKnown RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZDHHC8Q9ULC8 765 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TRGC2P03986 189 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 UBE2KP61086 200 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 GAMTQ14353 236 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 DEGS2Q6QHC5 323 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 DMRTC2Q8IXT2 367 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 Q8WTZ3 238 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RTN4IP1Q8WWV3 396 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RAB39BQ96DA2 213 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SUCNR1Q9BXA5 334 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SMOC1Q9H4F8 434 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 KLHL13Q9P2N7 655 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SPTY2D1-AS1A0A0U1RR47 76 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZNF729A6NN14 1252 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZNHIT1O43257 154 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 IGHV4-34P06331 123 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 EN2P19622 333 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TNFRSF4P43489 277 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HSD11B2P80365 405 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HS3ST3B1Q9Y662 390 aa17.95■□□□□ 0.46
MAP1LC3B-206ENST00000564844 FAM230AA0A1W2PPH8 454 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 H3BQ15 152 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CST7O76096 145 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 QDPRP09417 244 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 FABP4P15090 132 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CHATP28329 748 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RUNX1Q01196 453 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HMGN3Q15651 99 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 OR2G3Q8NGZ4 309 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HDGFL3Q9Y3E1 203 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SLC34A2O95436 690 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CAPZBP47756 277 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ERVFRD-1P60508 538 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 MYBPHQ13203 477 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SURF2Q15527 256 aaPredicted RBP17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HEPN1Q6WQI6 88 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 GPR173Q9NS66 373 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 KLRF1Q9NZS2 232 aa17.94■□□□□ 0.46
MAP1LC3B-206ENST00000564844 OR5H15A6NDH6 313 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HEXBP07686 556 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 PNLIPP16233 465 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 YPEL5P62699 121 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HNF4GQ14541 408 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 DMRT1Q9Y5R6 373 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SOD3P08294 240 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HOXA5P20719 270 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RABIFP47224 123 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 STARD6P59095 220 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZNF574Q6ZN55 896 aaPredicted RBP17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 OR2AE1Q8NHA4 323 aa17.93■□□□□ 0.46
MAP1LC3B-206ENST00000564844 MSTNO14793 375 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 PHF1O43189 567 aaPredicted RBP17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 GAPDHP04406 335 aaKnown RBP17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RSU1Q15404 277 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 PIGLQ9Y2B2 252 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CEACAM18A8MTB9 384 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 E5RGE8 158 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SSX9Q7RTT3 188 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 NTNG2Q96CW9 530 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 B3GAT1Q9P2W7 334 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SLC7A11Q9UPY5 501 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 KCNIP3Q9Y2W7 256 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 NSG2Q9Y328 171 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 VSTM2BA6NLU5 285 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 UEVLDQ8IX04 471 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CYB561D1Q8N8Q1 229 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TMEM234Q8WY98 164 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 LYZL4Q96KX0 146 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 PBDC1Q9BVG4 233 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZNF160Q9HCG1 818 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 POMT1Q9Y6A1 747 aa17.92■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TMEM131Q92545 1883 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 IGHV3-15A0A0B4J1V0 119 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZNF726A6NNF4 738 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 GATCO43716 136 aaKnown RBP17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CD63P08962 238 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 DLK1P80370 383 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CLEC12BQ2HXU8 276 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 LYPD6BQ8NI32 183 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 FAM131CQ96AQ9 280 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 OBP2AQ9NY56 170 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CCDC187A0A096LP49 1063 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms