RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TK1P04183 234 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 KRT8P05787 483 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 CHRM2P08172 466 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 LGALS4P56470 323 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 ERVFRD-1P60508 538 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 MFGE8Q08431 387 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 LRRC75BQ2VPJ9 315 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 SLC35E4Q6ICL7 350 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 ASRGL1Q7L266 308 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 C11orf42Q8N5U0 333 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 PPA2Q9H2U2 334 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 RANBP3Q9H6Z4 567 aaPredicted RBP9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 MRM2Q9UI43 246 aaKnown RBP9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 GTF2A1LQ9UNN4 478 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 SLC22A13Q9Y226 551 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 VWFP04275 2813 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 NOTCH1P46531 2555 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 METTL15A6NJ78 407 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 H3BUX3 64 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 K7N7A8 449 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 SYNGR1O43759 233 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 MITFO75030 526 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 GATBO75879 557 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 TFF1P04155 84 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 HTR1FP30939 366 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 GABRA5P31644 462 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 FUT6P51993 359 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 ERVK11-1P61568 191 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 MKXQ8IYA7 352 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 PNKDQ8N490 385 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 YIPF7Q8N8F6 280 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 OR8J1Q8NGP2 316 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 TRUB1Q8WWH5 349 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 RFKQ969G6 155 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 IL4I1Q96RQ9 567 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 ADI1Q9BV57 179 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 ELL3Q9HB65 397 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 GPR173Q9NS66 373 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 C19orf12Q9NSK7 152 aa9.92□□□□□ -0.82
GTF3C1-204ENST00000564664 FAM90A8PA6NJQ4 464 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 C17orf98A8MV24 154 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 VGLL3A8MV65 326 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 SYT7O43581 403 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 EPHA2P29317 976 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 ATP6V1E1P36543 226 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 DLX1P56177 255 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 PRB3Q04118 309 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 MEF2CQ06413 473 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 HERPUD1Q15011 391 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 DMRTC1Q5HYR2 192 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 PLEKHG7Q6ZR37 379 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 Q6ZTK2 550 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 BCDIN3DQ7Z5W3 292 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 KCTD20Q7Z5Y7 419 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 CATSPERDQ86XM0 798 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 Q8IYB0 196 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 ENTHD1Q8IYW4 607 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 OR4C13Q8NGP0 309 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 MALSU1Q96EH3 234 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 CENPNQ96H22 339 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 ZNF488Q96MN9 340 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 PLEKHA1Q9HB21 404 aa9.91□□□□□ -0.82
GTF3C1-204ENST00000564664 A0A1W2PQL4 384 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 H3BUI4 141 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 RPP14O95059 124 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 ZNF728P0DKX0 622 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 C1orf146Q5VVC0 180 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 CRIP3Q6Q6R5 217 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 ANGPTL5Q86XS5 388 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 DNAAF1Q8NEP3 725 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 OR4M1Q8NGD0 313 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 OR13D1Q8NGV5 346 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 OR2T6Q8NHC8 308 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 PP6455Q8WZ26 134 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 SNX22Q96L94 193 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 CEP19Q96LK0 163 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 MYCBPQ99417 103 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 GABARAPL3Q9BY60 117 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 TTTY10Q9BZA0 68 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 NPFFR1Q9GZQ6 430 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 OR14J1Q9UGF5 321 aa9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 TBL2Q9Y4P3 447 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-204ENST00000564664 FAM230AA0A1W2PPH8 454 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 MAGEB4O15481 346 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 RPSAP08865 295 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 CSF1P09603 554 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 UBCP0CG48 685 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 EFNB2P52799 333 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 CDC42P60953 191 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 COL10A1Q03692 680 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 CNN3Q15417 329 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 UBE2V2Q15819 145 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 SLC25A30Q5SVS4 291 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 TMEM244Q5VVB8 128 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 GDPD3Q7L5L3 318 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 AMIGO2Q86SJ2 522 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 EGFL6Q8IUX8 553 aa9.89□□□□□ -0.83
GTF3C1-204ENST00000564664 OR11H6Q8NGC7 330 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms