RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 SDSLQ96GA7 329 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 DMRTB1Q96MA1 342 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 ZCCHC4Q9H5U6 513 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 C7orf69Q9H7B7 122 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 SEBOXQ9HB31 216 aaPredicted RBP14.36□□□□□ -0.11
USB1-209ENST00000564387 MTCH1Q9NZJ7 389 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 DNAJB11Q9UBS4 358 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 ZNF281Q9Y2X9 895 aa14.36□□□□□ -0.11
USB1-209ENST00000564387 LSM2Q9Y333 95 aaKnown RBP14.36□□□□□ -0.11
USB1-209ENST00000564387 LOC105371242A0A075B767 164 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 TRBV5-5A0A0J9YX44 114 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 A0A1B0GW55 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 PTGES3LE9PB15 166 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 SIGLEC5O15389 551 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 ECDO95905 644 aaPredicted RBP14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L2P0CJ85 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L3P0CJ86 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L4P0CJ87 422 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L5P0CJ88 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L6P0CJ89 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L7P0CJ90 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 CRHBPP24387 322 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 ATP1B3P54709 279 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4L9Q6RFH8 374 aaPredicted RBP14.35□□□□□ -0.11
USB1-209ENST00000564387 LHFPL2Q6ZUX7 228 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 NPRL2Q8WTW4 380 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 SGCDQ92629 289 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 MED30Q96HR3 178 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 ZNF488Q96MN9 340 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 OPALINQ96PE5 141 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 GAFA1Q96PS6 74 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 RASSF4Q9H2L5 321 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 SNTG1Q9NSN8 517 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DUX4Q9UBX2 424 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 DHDHQ9UQ10 334 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 TPRKBQ9Y3C4 175 aa14.35□□□□□ -0.11
USB1-209ENST00000564387 MYL12BO14950 172 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 LIPFP07098 398 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 TUSC1Q2TAM9 212 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 SMIM21Q3B7S5 101 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 YIF1BQ5BJH7 314 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 FAM216BQ8N7L0 139 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 OR13C9Q8NGT0 318 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 MAB21L2Q9Y586 359 aa14.34□□□□□ -0.11
USB1-209ENST00000564387 F8VVB4 439 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 F8VWA3 439 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 DENRO43583 198 aaKnown RBP14.33□□□□□ -0.12
USB1-209ENST00000564387 SULT1B1O43704 296 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 ENSAO43768 121 aaKnown RBP14.33□□□□□ -0.12
USB1-209ENST00000564387 GPX5O75715 221 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 MTCP1P56278 107 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 CAV3P56539 151 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 GMFBP60983 142 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 IL13RA1P78552 427 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 PDZK1IP1Q13113 114 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 DGUOKQ16854 277 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 RBM48Q5RL73 367 aaKnown RBP14.33□□□□□ -0.12
USB1-209ENST00000564387 BTNL3Q6UXE8 466 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 SLC25A26Q70HW3 274 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 RNF144BQ7Z419 303 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 CD177Q8N6Q3 437 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 LY6G5BQ8NDX9 201 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 C8orf46Q8TAG6 207 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 TSEN15Q8WW01 171 aaKnown RBP14.33□□□□□ -0.12
USB1-209ENST00000564387 TMEM106AQ96A25 262 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 CEP19Q96LK0 163 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 ZNF184Q99676 751 aaPredicted RBP14.33□□□□□ -0.12
USB1-209ENST00000564387 NUDT16L1Q9BRJ7 211 aaKnown RBP14.33□□□□□ -0.12
USB1-209ENST00000564387 MND1Q9BWT6 205 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 AUP1Q9Y679 476 aa14.33□□□□□ -0.12
USB1-209ENST00000564387 RFPL4AA6NLU0 287 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 RFPL4AL1F8VTS6 287 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 NDUFB3O43676 98 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 NXPH2O95156 264 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 KNG1P01042 644 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 IFNA2P01563 188 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 ALDOBP05062 364 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 CD2P06729 351 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 OCM2P0CE71 109 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 SPHARQ15513 63 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 BTN2A1Q7KYR7 527 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 MKXQ8IYA7 352 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 Q8IYB0 196 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 SAXO1Q8IYX7 474 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 FGFRL1Q8N441 504 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 ZFP41Q8N8Y5 198 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 NANPQ8TBE9 248 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 UPRTQ96BW1 309 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 CNBD2Q96M20 576 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 MRI1Q9BV20 369 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 RHOFQ9HBH0 211 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 NEK6Q9HC98 313 aa14.32□□□□□ -0.12
USB1-209ENST00000564387 RPUSD1Q9UJJ7 312 aaKnown RBP14.32□□□□□ -0.12
USB1-209ENST00000564387 FBN1P35555 2871 aaKnown RBP14.31□□□□□ -0.12
USB1-209ENST00000564387 TRBV5-7A0A0A0MS05 114 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 NKX6-3A6NJ46 265 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 TFF1P04155 84 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 SELLP14151 372 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 IGFBP3P17936 291 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 550.1 ms