RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 CDH26Q8IXH8 852 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 CPNE2Q96FN4 548 aaPredicted RBP13.01□□□□□ -0.33
CDH11-209ENST00000564317 CEP19Q96LK0 163 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 KCTD7Q96MP8 289 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 FAM192AQ9GZU8 254 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 HES4Q9HCC6 221 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 GSTK1Q9Y2Q3 226 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
CDH11-209ENST00000564317 IGHV4-61A0A0C4DH41 118 aa13□□□□□ -0.33
CDH11-209ENST00000564317 A0A0G2JK05 382 aa13□□□□□ -0.33
CDH11-209ENST00000564317 OOEPA6NGQ2 149 aa13□□□□□ -0.33
CDH11-209ENST00000564317 KDM4BO94953 1096 aa13□□□□□ -0.33
CDH11-209ENST00000564317 CDRT1O95170 752 aa13□□□□□ -0.33
CDH11-209ENST00000564317 TFF1P04155 84 aa13□□□□□ -0.33
CDH11-209ENST00000564317 SFTPBP07988 381 aa13□□□□□ -0.33
CDH11-209ENST00000564317 ACAA1P09110 424 aaPredicted RBP13□□□□□ -0.33
CDH11-209ENST00000564317 CALCBP10092 127 aa13□□□□□ -0.33
CDH11-209ENST00000564317 GLRA1P23415 457 aa13□□□□□ -0.33
CDH11-209ENST00000564317 SDC2P34741 201 aa13□□□□□ -0.33
CDH11-209ENST00000564317 PTGFRP43088 359 aa13□□□□□ -0.33
CDH11-209ENST00000564317 CTF1Q16619 201 aa13□□□□□ -0.33
CDH11-209ENST00000564317 TEX36Q5VZQ5 186 aa13□□□□□ -0.33
CDH11-209ENST00000564317 GLT8D1Q68CQ7 371 aa13□□□□□ -0.33
CDH11-209ENST00000564317 ASCL4Q6XD76 172 aa13□□□□□ -0.33
CDH11-209ENST00000564317 FAM90A1Q86YD7 464 aa13□□□□□ -0.33
CDH11-209ENST00000564317 CLVS1Q8IUQ0 354 aaPredicted RBP13□□□□□ -0.33
CDH11-209ENST00000564317 MKXQ8IYA7 352 aa13□□□□□ -0.33
CDH11-209ENST00000564317 SAXO1Q8IYX7 474 aa13□□□□□ -0.33
CDH11-209ENST00000564317 ZSCAN4Q8NAM6 433 aaPredicted RBP13□□□□□ -0.33
CDH11-209ENST00000564317 PXT1Q8NFP0 134 aa13□□□□□ -0.33
CDH11-209ENST00000564317 OR10K1Q8NGX5 313 aa13□□□□□ -0.33
CDH11-209ENST00000564317 OR51F2Q8NH61 342 aa13□□□□□ -0.33
CDH11-209ENST00000564317 RAB1CQ92928 201 aa13□□□□□ -0.33
CDH11-209ENST00000564317 TIMD4Q96H15 378 aa13□□□□□ -0.33
CDH11-209ENST00000564317 NARFLQ9H6Q4 476 aa13□□□□□ -0.33
CDH11-209ENST00000564317 TMEM165Q9HC07 324 aa13□□□□□ -0.33
CDH11-209ENST00000564317 SMURF1Q9HCE7 757 aa13□□□□□ -0.33
CDH11-209ENST00000564317 RBFOX1Q9NWB1 397 aaKnown RBP13□□□□□ -0.33
CDH11-209ENST00000564317 IL36RNQ9UBH0 155 aa13□□□□□ -0.33
CDH11-209ENST00000564317 MRPS28Q9Y2Q9 187 aaKnown RBP13□□□□□ -0.33
CDH11-209ENST00000564317 ISPDA4D126 451 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 PDCD5O14737 125 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 SLC25A16P16260 332 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 MDH2P40926 338 aaKnown RBP12.99□□□□□ -0.33
CDH11-209ENST00000564317 CAV3P56539 151 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 VBP1P61758 197 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 ZNF404Q494X3 552 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 C1orf100Q5SVJ3 147 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 FAM166AQ6J272 317 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 ACP7Q6ZNF0 438 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 PEG10Q86TG7 708 aaKnown RBP12.99□□□□□ -0.33
CDH11-209ENST00000564317 LRRC28Q86X40 367 aaPredicted RBP12.99□□□□□ -0.33
CDH11-209ENST00000564317 PNLDC1Q8NA58 520 aaKnown RBP12.99□□□□□ -0.33
CDH11-209ENST00000564317 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
CDH11-209ENST00000564317 UQCC2Q9BRT2 126 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 KCNK15Q9H427 330 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 ING4Q9UNL4 249 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 V9GY05 133 aa12.99□□□□□ -0.33
CDH11-209ENST00000564317 TRAPPC2LH3BP13 241 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 SLC17A2O00624 439 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 SLC22A1O15245 554 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 NXPH2O95156 264 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 FSTL3O95633 263 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 CYB5AP00167 134 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 GYPAP02724 150 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 AMY2BP19961 511 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 RAB3BP20337 219 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 MXD1Q05195 221 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 BLMHQ13867 455 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 AWAT2Q6E213 333 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 GLIPR1L1Q6UWM5 242 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 OR5T2Q8NGG2 359 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 CLDND2Q8NHS1 167 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 EMG1Q92979 244 aaKnown RBP12.98□□□□□ -0.33
CDH11-209ENST00000564317 SLC25A28Q96A46 364 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 FOXRED1Q96CU9 486 aaPredicted RBP12.98□□□□□ -0.33
CDH11-209ENST00000564317 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 RASL12Q9NYN1 266 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 NLKQ9UBE8 527 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 DNAJB11Q9UBS4 358 aa12.98□□□□□ -0.33
CDH11-209ENST00000564317 A0A1B0GW55 424 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 A0A1W2PP11 408 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 RNF223E7ERA6 249 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 TNFRSF13BO14836 293 aaPredicted RBP12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L2P0CJ85 424 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L3P0CJ86 424 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L4P0CJ87 422 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L5P0CJ88 424 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L6P0CJ89 424 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L7P0CJ90 424 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 SNU13P55769 128 aaKnown RBP12.97□□□□□ -0.33
CDH11-209ENST00000564317 CLDN12P56749 244 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 P2RY14Q15391 338 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 SMIM21Q3B7S5 101 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 TMEM155Q4W5P6 130 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 HES5Q5TA89 166 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 STUMQ69YW2 141 aa12.97□□□□□ -0.33
CDH11-209ENST00000564317 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms