RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TK1P04183 234 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 EPHA2P29317 976 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 NXNL2Q5VZ03 156 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 Q6ZTK2 550 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 CALHM1Q8IU99 346 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 TCEANCQ8N8B7 351 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 PIFOQ8TCI5 191 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 RAB18Q9NP72 206 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 CLN6Q9NWW5 311 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 FOXJ3Q9UPW0 622 aa19.37■□□□□ 0.69
NME3-206ENST00000564252 CHST1O43916 411 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 MITFO75030 526 aaPredicted RBP19.36■□□□□ 0.69
NME3-206ENST00000564252 COX7A1P24310 79 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 ACTR3P61158 418 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 ERVK11-1P61568 191 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 SLX4IPQ5VYV7 408 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 C11orf88Q6PI97 169 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 TMEM163Q8TC26 289 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 KRT84Q9NSB2 600 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 H2AFY2Q9P0M6 372 aaPredicted RBP19.36■□□□□ 0.69
NME3-206ENST00000564252 OR14J1Q9UGF5 321 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 SNX5Q9Y5X3 404 aa19.36■□□□□ 0.69
NME3-206ENST00000564252 hCG_1809904A0A1W2PP81 198 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 A0A1W2PPE2 198 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 A0A1W2PR64 198 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 A0A1W2PRV1 198 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 ZAR1LA6NP61 321 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 ZNF670-ZNF695F2Z2N8 137 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 DNAJC8O75937 253 aaPredicted RBP19.35■□□□□ 0.69
NME3-206ENST00000564252 CCL1P22362 96 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 DLX6P56179 175 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 C12orf73Q69YU5 71 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 HIST2H2BDQ6DRA6 164 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 LIAT1Q6ZQX7 453 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 ANGPTL5Q86XS5 388 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 OR2T6Q8NHC8 308 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 CFHR4Q92496 578 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 SLC22A13Q9Y226 551 aa19.35■□□□□ 0.69
NME3-206ENST00000564252 FAM90A8PA6NJQ4 464 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 C17orf98A8MV24 154 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 LGALS4P56470 323 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 IL24Q13007 206 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 ZNF782Q6ZMW2 699 aaPredicted RBP19.34■□□□□ 0.69
NME3-206ENST00000564252 SSX6Q7RTT6 188 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 LHFPL4Q7Z7J7 247 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 KLHDC1Q8N7A1 406 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 PKIBQ9C010 78 aa19.34■□□□□ 0.69
NME3-206ENST00000564252 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.34■□□□□ 0.69
NME3-206ENST00000564252 K7N7A8 449 aa19.33■□□□□ 0.68
NME3-206ENST00000564252 PIPP12273 146 aaPredicted RBP19.33■□□□□ 0.68
NME3-206ENST00000564252 COL10A1Q03692 680 aa19.33■□□□□ 0.68
NME3-206ENST00000564252 DYNAPQ8N1N2 210 aa19.33■□□□□ 0.68
NME3-206ENST00000564252 C11orf44Q8N8P7 122 aa19.33■□□□□ 0.68
NME3-206ENST00000564252 TRMT10AQ8TBZ6 339 aaKnown RBP19.33■□□□□ 0.68
NME3-206ENST00000564252 IL4I1Q96RQ9 567 aa19.33■□□□□ 0.68
NME3-206ENST00000564252 VGLL3A8MV65 326 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 RPP14O95059 124 aaKnown RBP19.32■□□□□ 0.68
NME3-206ENST00000564252 ATP6AP1Q15904 470 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 KDM4DQ6B0I6 523 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 CATSPERDQ86XM0 798 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 GID4Q8IVV7 300 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 NPFFR1Q9GZQ6 430 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 DNAH3Q8TD57 4116 aa19.32■□□□□ 0.68
NME3-206ENST00000564252 DSCAML1Q8TD84 2053 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 ODF3BA8MYP8 253 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 F8VVB4 439 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 F8VWA3 439 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 G3V2T6 193 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 ZNF737O75373 536 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 ODF4Q2M2E3 257 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 YIPF7Q8N8F6 280 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 ASCC1Q8N9N2 400 aaKnown RBP19.31■□□□□ 0.68
NME3-206ENST00000564252 TBX5Q99593 518 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 CADM1Q9BY67 442 aaKnown RBP19.31■□□□□ 0.68
NME3-206ENST00000564252 GABARAPL1Q9H0R8 117 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 MTCH1Q9NZJ7 389 aa19.31■□□□□ 0.68
NME3-206ENST00000564252 IGKV1-27A0A075B6S5 117 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 FAM230AA0A1W2PPH8 454 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 G3V4G9 280 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 OPN1MWP04001 364 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 KRT8P05787 483 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 OPN1MW2P0DN77 364 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 OPN1MW3P0DN78 364 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 UBE2V2Q15819 145 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 LDLRAD2Q5SZI1 272 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 ZNF702PQ9H963 129 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 PLEKHA1Q9HB21 404 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 SLC7A11Q9UPY5 501 aa19.3■□□□□ 0.68
NME3-206ENST00000564252 TBL2Q9Y4P3 447 aaKnown RBP19.3■□□□□ 0.68
NME3-206ENST00000564252 MEX3AA1L020 520 aaKnown RBP19.29■□□□□ 0.68
NME3-206ENST00000564252 H3BSH0 61 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 RBP4P02753 201 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 ARG1P05089 322 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 CHRM2P08172 466 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 ZNF728P0DKX0 622 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 VSIG10L2P0DP72 767 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 RAB13P51153 203 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 BEAN1Q3B7T3 259 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 PLA1AQ53H76 456 aa19.29■□□□□ 0.68
NME3-206ENST00000564252 CCBE1Q6UXH8 406 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms