RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 UBE2E1P51965 193 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 RAB40BQ12829 278 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 MIDNQ504T8 468 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 KLHL22Q53GT1 634 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 ZBTB49Q6ZSB9 765 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 CEP19Q96LK0 163 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 BEX1Q9HBH7 125 aa12.2□□□□□ -0.46
SNX29-203ENST00000564111 SF3B6Q9Y3B4 125 aaKnown RBP12.2□□□□□ -0.46
SNX29-203ENST00000564111 RPL36Q9Y3U8 105 aaKnown RBP12.2□□□□□ -0.46
SNX29-203ENST00000564111 J3QRE1 110 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 RBP4P02753 201 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 AMY2BP19961 511 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 PRDX2P32119 198 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 GMFBP60983 142 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 LPCAT4Q643R3 524 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 RUSC1-AS1Q66K80 236 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 OR5T2Q8NGG2 359 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 OR2G2Q8NGZ5 317 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 MBOAT4Q96T53 435 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 HHLA2Q9UM44 414 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 PCDHGB5Q9Y5G0 923 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 ANK2Q01484 3957 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 NPFFO15130 113 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 FCN3O75636 299 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
SNX29-203ENST00000564111 TP53I3Q53FA7 332 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 HEXA-AS1Q9H8Q6 139 aa12.19□□□□□ -0.46
SNX29-203ENST00000564111 STAB1Q9NY15 2570 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 A0A1B0GW55 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 PAHP00439 452 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L2P0CJ85 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L3P0CJ86 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L4P0CJ87 422 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L5P0CJ88 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L6P0CJ89 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L7P0CJ90 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 RBP2P50120 134 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 MED21Q13503 144 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 GALEQ14376 348 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 ZIK1Q3SY52 487 aaPredicted RBP12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4L9Q6RFH8 374 aaPredicted RBP12.18□□□□□ -0.46
SNX29-203ENST00000564111 FAM185AQ8N0U4 392 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 PACRGLQ8N7B6 248 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 PPP1R14AQ96A00 147 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 JAM3Q9BX67 310 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
SNX29-203ENST00000564111 DUX4Q9UBX2 424 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 FAM230AA0A1W2PPH8 454 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 H0YAE9 185 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 MT-ND2P03891 347 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 OCM2P0CE71 109 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 OCMP0CE72 109 aaPredicted RBP12.18□□□□□ -0.46
SNX29-203ENST00000564111 DBTP11182 482 aaKnown RBP12.18□□□□□ -0.46
SNX29-203ENST00000564111 ATF1P18846 271 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 BMXP51813 675 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 ERVK11-1P61568 191 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 ZNF91Q05481 1191 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 AANATQ16613 207 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 PRSS35Q8N3Z0 413 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 SEH1LQ96EE3 360 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 COMMD4Q9H0A8 199 aa12.18□□□□□ -0.46
SNX29-203ENST00000564111 LOC100130705A0A1B0GUX0 176 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 TMEM212A6NML5 194 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 MAGEB4O15481 346 aaPredicted RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 SYNGR1O43759 233 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 APOL3O95236 402 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 IGHA1P01876 353 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 KIR3DL2P43630 455 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 RAG2P55895 527 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 RPL31P62899 125 aaKnown RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 SPIN3Q5JUX0 258 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 SAXO1Q8IYX7 474 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 ZSCAN4Q8NAM6 433 aaPredicted RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 SETD9Q8NE22 299 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 RHOXF1Q8NHV9 184 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 LGALS12Q96DT0 336 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 SMPD3Q9NY59 655 aaPredicted RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 MAB21L2Q9Y586 359 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 FUOMA2VDF0 154 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 ALX3O95076 343 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 GABRB1P18505 474 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 GBX2P52951 348 aaPredicted RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 ALKBH1Q13686 389 aaKnown RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 Q8N7P7 452 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
SNX29-203ENST00000564111 ALG8Q9BVK2 526 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 ZNF696Q9H7X3 374 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 ZNRD1Q9P1U0 126 aa12.17□□□□□ -0.46
SNX29-203ENST00000564111 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
SNX29-203ENST00000564111 MDFIC2A0A1B0GVS7 189 aa12.16□□□□□ -0.46
SNX29-203ENST00000564111 TK1P04183 234 aa12.16□□□□□ -0.46
SNX29-203ENST00000564111 IER3P46695 156 aa12.16□□□□□ -0.46
SNX29-203ENST00000564111 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms