RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SDSLQ96GA7 329 aa25.33■■□□□ 1.65
CMTM4-204ENST00000563952 INPP5EQ9NRR6 644 aa25.33■■□□□ 1.65
CMTM4-204ENST00000563952 IGKV1-27A0A075B6S5 117 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 A0A1W2PQ09 198 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 WBP4O75554 376 aaKnown RBP25.32■■□□□ 1.64
CMTM4-204ENST00000563952 IL24Q13007 206 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 ALKBH1Q13686 389 aaKnown RBP25.32■■□□□ 1.64
CMTM4-204ENST00000563952 KLHL22Q53GT1 634 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 SYS1Q8N2H4 156 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 ZNF676Q8N7Q3 588 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 OR10AC1Q8NH08 325 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 C8orf46Q8TAG6 207 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 OR14J1Q9UGF5 321 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 HHLA2Q9UM44 414 aa25.32■■□□□ 1.64
CMTM4-204ENST00000563952 IGHV1-69DA0A0B4J2H0 117 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 INMTO95050 263 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 IGHV1-69P01742 117 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 PRDX2P32119 198 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 KIR3DL3Q8N743 410 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 PACRGLQ8N7B6 248 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 OR13C3Q8NGS6 347 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 CNIH3Q8TBE1 160 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 ZMAT3Q9HA38 289 aaKnown RBP25.31■■□□□ 1.64
CMTM4-204ENST00000563952 C8orf4Q9NR00 106 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 SIRT7Q9NRC8 400 aa25.31■■□□□ 1.64
CMTM4-204ENST00000563952 MRPS18AQ9NVS2 196 aaKnown RBP25.31■■□□□ 1.64
CMTM4-204ENST00000563952 OR4C45A6NMZ5 311 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 SLC1A7O00341 560 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 SLC9A3R2Q15599 337 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 ZNF691Q5VV52 312 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 OR51A4Q8NGJ6 313 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 SLAMF9Q96A28 289 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 DMRTB1Q96MA1 342 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 ZNF649Q9BS31 505 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 HES4Q9HCC6 221 aa25.3■■□□□ 1.64
CMTM4-204ENST00000563952 TMEM89A2RUT3 159 aa25.29■■□□□ 1.64
CMTM4-204ENST00000563952 PRB3Q04118 309 aaPredicted RBP25.29■■□□□ 1.64
CMTM4-204ENST00000563952 SLC25A26Q70HW3 274 aa25.29■■□□□ 1.64
CMTM4-204ENST00000563952 ZNF561Q8N587 486 aa25.29■■□□□ 1.64
CMTM4-204ENST00000563952 SLC25A28Q96A46 364 aa25.29■■□□□ 1.64
CMTM4-204ENST00000563952 CEP19Q96LK0 163 aa25.29■■□□□ 1.64
CMTM4-204ENST00000563952 E9PI62 339 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 HAX1O00165 279 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 ATF1P18846 271 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 ATP1B3P54709 279 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 DLX1P56177 255 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 ERVK11-1P61568 191 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 TTC23Q5W5X9 447 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 FAM185AQ8N0U4 392 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 Q8N7P7 452 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 MTCH1Q9NZJ7 389 aa25.28■■□□□ 1.64
CMTM4-204ENST00000563952 IGKV1-9A0A0C4DH69 117 aa25.27■■□□□ 1.64
CMTM4-204ENST00000563952 HOXA3O43365 443 aaPredicted RBP25.27■■□□□ 1.64
CMTM4-204ENST00000563952 OCM2P0CE71 109 aa25.27■■□□□ 1.64
CMTM4-204ENST00000563952 OCMP0CE72 109 aaPredicted RBP25.27■■□□□ 1.64
CMTM4-204ENST00000563952 AZGP1P25311 298 aaKnown RBP25.27■■□□□ 1.64
CMTM4-204ENST00000563952 RBP2P50120 134 aa25.27■■□□□ 1.64
CMTM4-204ENST00000563952 GBX2P52951 348 aaPredicted RBP25.27■■□□□ 1.64
CMTM4-204ENST00000563952 UTS2BQ765I0 119 aa25.27■■□□□ 1.64
CMTM4-204ENST00000563952 DHRSXQ8N5I4 330 aa25.27■■□□□ 1.64
CMTM4-204ENST00000563952 DNAAF1Q8NEP3 725 aa25.27■■□□□ 1.64
CMTM4-204ENST00000563952 FGF20Q9NP95 211 aaPredicted RBP25.27■■□□□ 1.64
CMTM4-204ENST00000563952 F8VVB4 439 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 F8VWA3 439 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 CLDN34H7C241 214 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 KNG1P01042 644 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 RNASE1P07998 156 aaKnown RBP25.26■■□□□ 1.63
CMTM4-204ENST00000563952 PRKACBP22694 351 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 POU3F4P49335 361 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 MTCP1P56278 107 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 MRPL28Q13084 256 aaKnown RBP25.26■■□□□ 1.63
CMTM4-204ENST00000563952 EGFL6Q8IUX8 553 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 SETD9Q8NE22 299 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 TNFRSF19Q9NS68 423 aa25.26■■□□□ 1.63
CMTM4-204ENST00000563952 TRBV23-1A0A0A0MS06 115 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 LIMS3P0CW19 117 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 LIMS4P0CW20 117 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 OR5AK2Q8NH90 309 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 PRDM13Q9H4Q3 707 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 NOX4Q9NPH5 578 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 C19orf12Q9NSK7 152 aa25.25■■□□□ 1.63
CMTM4-204ENST00000563952 ZFPL1O95159 310 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 CCDC159P0C7I6 412 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 COMPP49747 757 aaPredicted RBP25.24■■□□□ 1.63
CMTM4-204ENST00000563952 ADARB1P78563 741 aaKnown RBP25.24■■□□□ 1.63
CMTM4-204ENST00000563952 KLRD1Q13241 179 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 BLMHQ13867 455 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 Q6YL49 198 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 OR13C9Q8NGT0 318 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 OPALINQ96PE5 141 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 PDCD1LG2Q9BQ51 273 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 JAM3Q9BX67 310 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 COMMD4Q9H0A8 199 aa25.24■■□□□ 1.63
CMTM4-204ENST00000563952 A0A0U1RQK1 487 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 A0A1W2PRD5 423 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 A0A1W2PRF3 423 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 A0A1W2PRM7 423 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 TMEM212A6NML5 194 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 RNASEK-C17orf49H0YIS7 233 aa25.23■■□□□ 1.63
CMTM4-204ENST00000563952 M0R1W7 72 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms