RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 RFPL4AL1F8VTS6 287 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 H3BNX3 289 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF593O00488 134 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-204ENST00000563739 IDH3BO43837 385 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF737O75373 536 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 MMP23AO75900 390 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 CCNB2O95067 398 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 BAG2O95816 211 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 ARG1P05089 322 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 PIPP12273 146 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-204ENST00000563739 SPI1P17947 270 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 GNALP38405 381 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 LUMP51884 338 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-204ENST00000563739 UTF1Q5T230 341 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 ZFP1Q6P2D0 407 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 DTX3Q8N9I9 347 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 AQP11Q8NBQ7 271 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 POC1AQ8NBT0 407 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 OR10G2Q8NGC3 310 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 OR8B12Q8NGG6 310 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 OR4P4Q8NGL7 312 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 PYDC1Q8WXC3 89 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 TFAP2CQ92754 450 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 RNF170Q96K19 258 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 HES4Q9HCC6 221 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 PITPNC1Q9UKF7 332 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 KLHDC2Q9Y2U9 406 aa8.21□□□□□ -1.1
SF3B3-204ENST00000563739 ARRDC5A6NEK1 342 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 PRR32B1ATL7 298 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 F2RL2O00254 374 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 GNGT2O14610 69 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 E2F6O75461 281 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 IGLV3-1P01715 115 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 LPLP06858 475 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 SNRNP70P08621 437 aaKnown RBP8.2□□□□□ -1.1
SF3B3-204ENST00000563739 PGA5P0DJD9 388 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 IGHV1-8P0DP01 117 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 LGALS4P56470 323 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 RPL23AP62750 156 aaKnown RBP8.2□□□□□ -1.1
SF3B3-204ENST00000563739 GRB2P62993 217 aaKnown RBP8.2□□□□□ -1.1
SF3B3-204ENST00000563739 TSPAN31Q12999 210 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 ATP6AP1Q15904 470 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 MICAQ29983 383 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 OR2W3Q7Z3T1 314 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 TMEM179BQ7Z7N9 219 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 TIGD4Q8IY51 512 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 ZDHHC23Q8IYP9 409 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 BATF2Q8N1L9 274 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 OR2T4Q8NH00 348 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 OR2T27Q8NH04 317 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 PIGCQ92535 297 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 DGCR6LQ9BY27 220 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 BRD7Q9NPI1 651 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 TBC1D23Q9NUY8 699 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 ARMC1Q9NVT9 282 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 DNAJB9Q9UBS3 223 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 HHLA2Q9UM44 414 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 HILPDAQ9Y5L2 63 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 CDH10Q9Y6N8 788 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
SF3B3-204ENST00000563739 ANXA2P2A6NMY6 339 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF732B4DXR9 585 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 CASQ2O14958 399 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-204ENST00000563739 RBP4P02753 201 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 TK1P04183 234 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 FCGR1AP12314 374 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 PRDX2P32119 198 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 ERVK11-1P61568 191 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 DGCR2P98153 550 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 EIF2B1Q14232 305 aaKnown RBP8.19□□□□□ -1.1
SF3B3-204ENST00000563739 ABCA11PQ4W5N1 156 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 CEP78Q5JTW2 689 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 HAGHLQ6PII5 290 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-204ENST00000563739 CALHM1Q8IU99 346 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 OR52H1Q8NGJ2 320 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 GIPC3Q8TF64 312 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 DNAJC9Q8WXX5 260 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 NRIP2Q9BQI9 281 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 MED20Q9H944 212 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 ABCB10Q9NRK6 738 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 AP4S1Q9Y587 144 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 HECTD4Q9Y4D8 3996 aa8.19□□□□□ -1.1
SF3B3-204ENST00000563739 IGHV2-26A0A0B4J1V2 119 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 TMEM82A0PJX8 343 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 F8VVB4 439 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 F8VWA3 439 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 NOS1APO75052 506 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-204ENST00000563739 PEX14O75381 377 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 GASTP01350 101 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 ALDOBP05062 364 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF728P0DKX0 622 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 PAICSP22234 425 aaKnown RBP8.18□□□□□ -1.1
SF3B3-204ENST00000563739 AZGP1P25311 298 aaKnown RBP8.18□□□□□ -1.1
SF3B3-204ENST00000563739 FASP25445 335 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 LMO1P25800 156 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 FMO3P31513 532 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms