RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 POLR3HQ9Y535 204 aaPredicted RBP1.73□□□□□ -2.13
HDGFL3-202ENST00000562702 TIMM10BQ9Y5J6 103 aa1.73□□□□□ -2.13
HDGFL3-202ENST00000562702 URGCP-MRPS24S4R325 110 aa1.73□□□□□ -2.13
HDGFL3-202ENST00000562702 DSPP15924 2871 aaKnown RBP1.73□□□□□ -2.13
HDGFL3-202ENST00000562702 APC2O95996 2303 aa1.73□□□□□ -2.13
HDGFL3-202ENST00000562702 NYNRINQ9P2P1 1898 aaKnown RBP1.73□□□□□ -2.13
HDGFL3-202ENST00000562702 IGSF10Q6WRI0 2623 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CACNA1DQ01668 2161 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 TCRBV9S1A1TA0A576 114 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 TMEM213A2RRL7 107 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GOLGA8JA6NMD2 632 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 E5RI56 91 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 H3BNH8 94 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GOLGA8MH3BSY2 632 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SULT1C2O00338 296 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 XKRYO14609 159 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PPP1R2P9O14990 202 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 BET1O15155 118 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 RAD51BO15315 384 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 COCHO43405 550 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 XRCC2O43543 280 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SLC37A4O43826 429 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CD5LO43866 347 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SOX15O60248 233 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 NDUFS6O75380 124 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 FCN3O75636 299 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ZMPSTE24O75844 475 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 TNFAIP8O95379 198 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PSMG1O95456 288 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CTDNEP1O95476 244 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ASS1P00966 412 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CST4P01036 141 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 HLA-HP01893 362 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PRB1P04280 392 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 IFNW1P05000 195 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 KRT16P08779 473 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ZDHHC11BP0C7U3 371 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GKN3PP0CG01 181 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GIMD1P0DJR0 217 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 KITLGP21583 273 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 BGNP21810 368 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CD82P27701 267 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 EVI2BP34910 448 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 BTCP35070 178 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 P2RY2P41231 377 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PPP1R2P41236 205 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 HSPA13P48723 471 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CDC34P49427 236 aaPredicted RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PSMD7P51665 324 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 AP2S1P53680 142 aaPredicted RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 UGT2B15P54855 530 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 B2MP61769 119 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 HMGCS1Q01581 520 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ACVR1Q04771 509 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PPIDQ08752 370 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 LAMTOR4Q0VGL1 99 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 MED21Q13503 144 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GK3PQ14409 553 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SPA17Q15506 151 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 BCL2A1Q16548 175 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SGCAQ16586 387 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 DUSP7Q16829 419 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 AKIRIN2Q53H80 203 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 COQ5Q5HYK3 327 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CDKL4Q5MAI5 379 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PPM1LQ5SGD2 360 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 TPRG1LQ5T0D9 272 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 IDNKQ5T6J7 187 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 THOC7Q6I9Y2 204 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ADNP2Q6IQ32 1131 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PPP1R2P3Q6NXS1 205 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SPESP1Q6UW49 350 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SLC35D2Q76EJ3 337 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 NIPA1Q7RTP0 329 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CMC1Q7Z7K0 106 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 DHDDSQ86SQ9 333 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SETD3Q86TU7 594 aaPredicted RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 BBS7Q8IWZ6 715 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SELENOHQ8IZQ5 122 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 RNF182Q8N6D2 247 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 Q8N976 141 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 OR8J2Q8NGG1 315 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 OR5AK3PQ8NH89 298 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 UBALD1Q8TB05 177 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PHF10Q8WUB8 498 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 NRGNQ92686 78 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CPNE4Q96A23 557 aaPredicted RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ISOC2Q96AB3 205 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 BMFQ96LC9 184 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 MBOAT7Q96N66 472 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SERPINB11Q96P15 392 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ATP5SQ99766 215 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SPIN2AQ99865 258 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 SPIN2BQ9BPZ2 258 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ANGPTL4Q9BY76 406 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ING2Q9H160 280 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 KIR3DX1Q9H7L2 352 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 NIPAL2Q9H841 368 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 MRM3Q9HC36 420 aaKnown RBP1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 ZDHHC4Q9NPG8 344 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms