RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 OR5M9Q8NGP3 310 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 RHOXF1Q8NHV9 184 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 IL22RA2Q969J5 263 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 NEIL2Q969S2 332 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TADA1Q96BN2 335 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TEX37Q96LM6 180 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ACTR3CQ9C0K3 210 aaPredicted RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 SLIRPQ9GZT3 109 aaKnown RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 MEGF9Q9H1U4 602 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ABCG5Q9H222 651 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 DUSP21Q9H596 190 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 B3GAT2Q9NPZ5 323 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 RBM22Q9NW64 420 aaKnown RBP eCLIP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 SLC25A37Q9NYZ2 338 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 HSPB8Q9UJY1 196 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 PCTPQ9UKL6 214 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 RAB22AQ9UL26 194 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ABT1Q9ULW3 272 aaKnown RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TPRKBQ9Y3C4 175 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ORC6Q9Y5N6 252 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CROCCQ5TZA2 2017 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 PLXNB2O15031 1838 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 MYO18AQ92614 2054 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 BRCA1P38398 1863 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 SHROOM3Q8TF72 1996 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 GLYATL1P3A0A0U1RQE8 302 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 SMIM28A0A1B0GU29 152 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 E5RGE8 158 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 G3V4G9 280 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 AIPO00170 330 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ENSAO43768 121 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR7C2O60412 319 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LDB3O75112 727 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 EML2O95834 649 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 UBBP0CG47 229 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LIMS3P0CW19 117 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LIMS4P0CW20 117 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR5H8P0DN80 308 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 HLA-EP13747 358 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 KIR2DS4P43632 304 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 P2RY1P47900 373 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 GAS1P54826 345 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 RIPPLY3P57055 190 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 CLDN2P57739 230 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 MTPNP58546 118 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 DCDP81605 110 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 CDK3Q00526 305 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 CDK6Q00534 326 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 PIGFQ07326 219 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 BCL2L1Q07817 233 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR5I1Q13606 314 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 HTR4Q13639 388 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 EIF2B1Q14232 305 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 GNMTQ14749 295 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 KIAA0040Q15053 153 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 C3AR1Q16581 482 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LRRC75BQ2VPJ9 315 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ATP6AP1LQ52LC2 224 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LDLRAD2Q5SZI1 272 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LAMTOR1Q6IAA8 161 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ZNF549Q6P9A3 640 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 WDR74Q6RFH5 385 aaPredicted RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ENPP6Q6UWR7 440 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 RASSF6Q6ZTQ3 369 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 FA2HQ7L5A8 372 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 PPP1R32Q7Z5V6 425 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 HAPLN4Q86UW8 402 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 UBALD2Q8IYN6 164 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 TMEM86AQ8N2M4 240 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 PNPLA1Q8N8W4 532 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 SLC16A11Q8NCK7 471 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR2T12Q8NG77 320 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR10G4Q8NGN3 311 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR10R2Q8NGX6 335 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 MCFD2Q8NI22 146 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 PPTC7Q8NI37 304 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 PLPPR1Q8TBJ4 325 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 STAG3L4Q8TBR4 150 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OR8D1Q8WZ84 308 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 NUS1Q96E22 293 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 BTF3L4Q96K17 158 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 DNAJC30Q96LL9 226 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 PITX2Q99697 317 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 TAPBPLQ9BX59 468 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 LINC00470Q9BZP3 86 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 MAP1LC3AQ9H492 121 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ZDHHC11Q9H8X9 412 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 CDH20Q9HBT6 801 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ENY2Q9NPA8 101 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ACOT13Q9NPJ3 140 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 HINT3Q9NQE9 182 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 SLC7A10Q9NS82 523 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 SCN3BQ9NY72 215 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 OPTCQ9UBM4 332 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 FBLN5Q9UBX5 448 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 KCNS2Q9ULS6 477 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 AK6Q9Y3D8 172 aaKnown RBP4.77□□□□□ -1.65
CAPN3-211ENST00000562199 ETV7Q9Y603 341 aa4.77□□□□□ -1.65
CAPN3-211ENST00000562199 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms