RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 KCNMB1Q16558 191 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 TAF9Q16594 264 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC16A14Q7RTX9 510 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 KDF1Q8NAX2 398 aaPredicted RBP12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 TSTD1Q8NFU3 115 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 REEP6Q96HR9 211 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 CHST5Q9GZS9 411 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC35B3Q9H1N7 401 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 ARV1Q9H2C2 271 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 OR51M1Q9H341 326 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 NAA60Q9H7X0 242 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 NECAP2Q9NVZ3 263 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 ADAMTS9Q9P2N4 1935 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 A0A1W2PR77 199 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 MASP2O00187 686 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 ANGPTL7O43827 346 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 CA11O75493 328 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 OR8U8P0C7N1 319 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 S100PP25815 95 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 MTCP1P56278 107 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 FBXW12Q6X9E4 464 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 TMEM182Q6ZP80 229 aaPredicted RBP12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 NFAM1Q8NET5 270 aaPredicted RBP12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 GJC3Q8NFK1 279 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 ZNF501Q96CX3 271 aaPredicted RBP12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 SCRT1Q9BWW7 348 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 LIME1Q9H400 295 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 GPR173Q9NS66 373 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 B3GALT1Q9Y5Z6 326 aa12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 PUS1Q9Y606 427 aaKnown RBP eCLIP12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 SPTBN5Q9NRC6 3674 aaKnown RBP12.21□□□□□ -0.46
VPS9D1-202ENST00000561976 AP4M1O00189 453 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 CLN5O75503 358 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 MSR1P21757 451 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 NHLH2Q02577 135 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 TMEM187Q14656 261 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 RHEBQ15382 184 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 RSU1Q15404 277 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 DTX1Q86Y01 620 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 OR5L1Q8NGL2 311 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 AK3Q9UIJ7 227 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 V9GYS6 101 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 IGHV2-5P01817 119 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 PMELP40967 661 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 ASCL1P50553 236 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 EIF3IQ13347 325 aaKnown RBP12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 GPR157Q5UAW9 335 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 NAXEQ8NCW5 288 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 Q96M66 194 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 GNRHR2Q96P88 292 aa12.2□□□□□ -0.46
VPS9D1-202ENST00000561976 LAMA1P25391 3075 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 A0A0U1RQV5 110 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 FAM230AA0A1W2PPH8 454 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 SPRY1O43609 319 aaPredicted RBP12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 OR2J2O76002 312 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 DBHP09172 617 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 CHATP28329 748 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 CSNK1A1P48729 337 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 RAB5CP51148 216 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 UCP2P55851 309 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 HIST3H3Q16695 136 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 NCMAPQ5T1S8 102 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 FIP1L1Q6UN15 594 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 OR52M1Q8NGK5 317 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 OR5L2Q8NGL0 311 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 SDK1Q7Z5N4 2213 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 NSG1A0A0A6YYJ2 146 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 FAM221AA4D161 298 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 IFNA17P01571 189 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 CTSSP25774 331 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 DUSP1P28562 367 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 SUCLG1P53597 346 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 SOHLH1Q5JUK2 328 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 BRICD5Q6PL45 260 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 C20orf196Q8IYI0 205 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 SUMF2Q8NBJ7 301 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 DYRK2Q92630 601 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 RBM24Q9BX46 236 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 LMAN1LQ9HAT1 526 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 ZNF581Q9P0T4 197 aa12.19□□□□□ -0.46
VPS9D1-202ENST00000561976 SHISA7A6NL88 538 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 AQP7P3A6NL99 342 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 M0R135 149 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 OR2C1O95371 312 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 IGLV3-1P01715 115 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 PTGDSP41222 190 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 OR2M3Q8NG83 312 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 ZNF799Q96GE5 643 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 NELFAQ9H3P2 528 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms