RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 NARFLQ9H6Q4 476 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 FKRPQ9H9S5 495 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 NGBQ9NPG2 151 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 MEPEQ9NQ76 525 aaPredicted RBP2.69□□□□□ -1.98
SPG11-225ENST00000561391 SERINC1Q9NRX5 453 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 TNFRSF19Q9NS68 423 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 TXNL4BQ9NX01 149 aaKnown RBP2.69□□□□□ -1.98
SPG11-225ENST00000561391 FLRT3Q9NZU0 649 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 ABRACLQ9P1F3 81 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CLCF1Q9UBD9 225 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 FBXL17Q9UF56 701 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 OR14J1Q9UGF5 321 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CHRNA9Q9UGM1 479 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CLEC2DQ9UHP7 191 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 DAPK2Q9UIK4 370 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CMAHPQ9Y471 501 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 FKBP7Q9Y680 259 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CSMD3Q7Z407 3707 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 IGLV5-37A0A075B6J1 123 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TRAV27A0A087WT01 109 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 A0A087WZY1 265 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TRBV2A0A0J9YWF9 115 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 A0A1B0GUS0 222 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 A0A1W2PQ09 198 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 A0A1W2PQL4 384 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 A0A1W2PRG6 482 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 hCG_1807616A0A1W2PRN6 198 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 FUOMA2VDF0 154 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 C5orf63A6NC05 138 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 CCDC182A6NF36 153 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SLC22A20A6NK97 555 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 CENPXA8MT69 81 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 C12orf71A8MTZ7 269 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 BLOC1S5-TXNDC5H3BN57 136 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 J3QRK9 145 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 XKRYO14609 159 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OGG1O15527 345 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SPINT2O43291 252 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZNF208O43345 1280 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 RNF13O43567 381 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TSPAN2O60636 221 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZNF254O75437 659 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TSPAN9O75954 239 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 GLCEO94923 617 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR2C1O95371 312 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 AHSA1O95433 338 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 NUDT14O95848 222 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PNPP00491 289 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 IGKV1D-16P01601 117 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 KRT8P05787 483 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 CRYBA1P05813 215 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 MSMBP08118 114 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ASAH2BP0C7U1 165 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 IGHV4-30-4P0DP06 118 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SLC2A5P22732 501 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TCEA1P23193 301 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 GTF2E2P29084 291 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 CRABP1P29762 137 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PYCR1P32322 319 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 RPS5P46782 204 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 INPP1P49441 399 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 THBS3P49746 956 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 P2RX1P51575 399 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 CAPZA1P52907 286 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 RAG2P55895 527 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 RAB25P57735 213 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 MRPS10P82664 201 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 FABP5Q01469 135 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 RASGEF1BQ0VAM2 473 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZP4Q12836 540 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 CRMP1Q14194 572 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 EBPQ15125 230 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 TOMM34Q15785 309 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 ADIPOQQ15848 244 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SGCBQ16585 318 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZNF74Q16587 644 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 IZUMO4Q1ZYL8 232 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZNF791Q3KP31 576 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 ACSM3Q53FZ2 586 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 YIF1BQ5BJH7 314 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TRIQKQ629K1 86 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 DMKNQ6E0U4 476 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 C22orf42Q6IC83 251 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 DEGS2Q6QHC5 323 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 FAM131AQ6UXB0 335 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 LRRN1Q6UXK5 716 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 NPSR1Q6W5P4 371 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 WDR88Q6ZMY6 472 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 DGAT2L6Q6ZPD8 337 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OLIG3Q7RTU3 272 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SLC16A9Q7RTY1 509 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 NANOGNBQ7Z5D8 188 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 CEACAM19Q7Z692 300 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 HMGN2P46Q86SG4 172 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 LRRC28Q86X40 367 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR8H2Q8N162 312 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TEX29Q8N6K0 151 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZNF321PQ8N8H1 164 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 POC5Q8NA72 575 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 NPEPL1Q8NDH3 523 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms